STRUCTURE OF THE N-TERMINAL OF SIALOADHESIN IN COMPLEX WITH 2-PHENYL-PROP5AC
2BVE
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Immune System
    Structure Weight: 27465.25
    Molecule: SIALOADHESIN
    Polymer: 1 Type: protein Length: 119
    Chains: A, B
    Fragment: DOMAIN ONE, IG-LIKE V-TYPE DOMAIN, RESIDUES 20-138
    Organism: Mus musculus
    Gene Names: Siglec1 Sa Sn
    UniProtKB: Protein Feature View | Search PDB | Q62230  
     
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  •   Source Hide
    Polymer: 1
    Scientific Name: Mus musculus   Taxonomy   Common Name: Mouse Expression System: Cricetulus griseus  
     
  •   Related PDB Entries Hide
    Identifier Details
    1OD7   N-TERMINAL OF SIALOADHESIN IN COMPLEX WITH ME-A-9-N-(NAPHTHYL-2-CARBONYL)-AMINO-9- DEOXY-NEU5AC (NAP COMPOUND) 
    1OD9   N-TERMINAL OF SIALOADHESIN IN COMPLEX WITH ME-A-9-N-BENZOYL-AMINO-9-DEOXY-NEU5AC ( BENZ COMPOUND) 
    1ODA   N-TERMINAL OF SIALOADHESIN IN COMPLEX WITH ME-A-9-N-(BIPHENYL-4-CARBONYL)-AMINO-9- DEOXY-NEU5AC (BIP COMPOUND) 
    1QFO   N-TERMINAL DOMAIN OF SIALOADHESIN (MOUSE) IN COMPLEX WITH 3'SIALYLLACTOSE 
    1QFP   N-TERMINAL DOMAIN OF SIALOADHESIN (MOUSE) 
    1URL   N-TERMINAL DOMAIN OF SIALOADHESIN (MOUSE) IN COMPLEX WITH GLYCOPEPTIDE 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    PH5
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    PH5 C19 H27 N O9
    2-PHENYL-PROP5AC
    PH5:2BVE
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    PH5
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    PH5
    N/Ain BindingDB
    IC50: 215000 nM - data from BindingMOAD  
    N/Ain PDBbind
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PQS (software)
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  •   Deposition Summary Hide
    Authors:   Zaccai, N.R.,  May, A.P.,  Robinson, R.C.,  Burtnick, L.D.,  Crocker, P.,  Brossmer, R.,  Kelm, S.,  Jones, E.Y.

    Deposition:   2005-06-27
    Release:   2006-07-19
    Last Modified (REVDAT):   2009-06-02
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   2.20
    R-Value: 0.201 (obs.)
    R-Free: 0.270
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 31.97 α = 90.00 
    b = 70.96 β = 90.00 
    c = 102.65 γ = 90.00