1RT3

AZT DRUG RESISTANT HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH 1051U91

Structural Biology Knowledgebase: 1RT3 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.335
  • R-Value Work: 0.264

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1RT3

Classification: NUCLEOTIDYLTRANSFERASE

Total Structure Weight: 116392.70

Macromolecule Entities
Molecule Chains Length Organism Details
HIV-1 REVERSE TRANSCRIPTASE A 560 Human immunodeficiency virus 1 EC#: 2.7.7.49 IUBMB
Mutation: D67N, K70R, T215F, K219Q, C280X
Gene Name(s): gag-pol
HIV-1 REVERSE TRANSCRIPTASE B 440 Human immunodeficiency virus 1 EC#: 2.7.7.49 IUBMB
Mutation: D67N, K70R
Gene Name(s): gag-pol

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
U05
Query on U05

A 6,11-DIHYDRO-11-ETHYL-6-METHYL-9-NITRO-5H- PYRIDO[2,3-B][1,5]BENZODIAZEPIN-5-ONE
1051U91 (Synonym)
C15 H14 N4 O3
YCFJZPGDTZVVSM-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
CSD
Query on CSD
A L-PEPTIDE LINKING C3 H7 N O4 S CYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.335
  • R-Value Work: 0.264
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 138.90 α = 90.00
b = 114.40 β = 90.00
c = 65.60 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-06-29
  • Released Date: 1999-02-16
  • Deposition author(s): Ren, J., Stammers, D.K., Stuart, D.I.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4