1KZ8

CRYSTAL STRUCTURE OF PORCINE FRUCTOSE-1,6-BISPHOSPHATASE COMPLEXED WITH A NOVEL ALLOSTERIC-SITE INHIBITOR

Structural Biology Knowledgebase: 1KZ8 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.177

Literature

Macromolecules
Sequence Display for 1KZ8

Classification: HYDROLASE

Total Structure Weight: 75576.74

Macromolecule Entities
Molecule Chains Length Organism Details
FRUCTOSE-1,6-BISPHOSPHATASE A, F 337 Sus scrofa EC#: 3.1.3.11 IUBMB
Mutation: E20Q, S96T, D199N
Gene Name(s): FBP1 Gene View FBP
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PFE
Query on PFE

A, F {4-[3-(6,7-DIETHOXY-QUINAZOLIN-4-YLAMINO)- PHENYL]-THIAZOL-2-YL}-METHANOL
C22 H22 N4 O3 S
ZJESXGUODSBHSK-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
AMP
Query on AMP

A, F ADENOSINE MONOPHOSPHATE
C10 H14 N5 O7 P
UDMBCSSLTHHNCD-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
F6P
Query on F6P

A, F FRUCTOSE-6-PHOSPHATE
C6 H13 O9 P
BGWGXPAPYGQALX-ARQDHWQXSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MN
Query on MN

A, F MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
PFE IC50: 340 - >10000 nM (86) BindingDB

IC50: 830 nM  BindingMOAD
IC50: 830 nM  PDBbind
AMP IC50: 140 - 9800 nM (89 - 99) BindingDB

N/A in BindingMoad


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.177
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 59.65 α = 90.00
b = 165.94 β = 90.00
c = 79.22 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-02-06
  • Released Date: 2002-10-16
  • Deposition author(s): Wright, S.W., Carlo, A.A., Carty, M.D., Danley, D.E., Hageman, D.L., Karam, G.A., Levy, C.B., Mansour, M.N., Mathiowetz, A.M., McClure, L.D., Nestor, N.B., McPherson, R.K., Pandit, J., Pustilnik, L.R., Schulte, G.K., Soeller, W.C., Treadway, J.L., Wang, I.-K., Bauer, P.H.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values