1KGJ

Rat transthyretin (also called prealbumin) complex with 3',5'-dibromoflavone (EMD21388)

Structural Biology Knowledgebase: 1KGJ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.288
  • R-Value Work: 0.203

Literature

Macromolecules
Sequence Display for 1KGJ

Classification: TRANSPORT PROTEIN

Total Structure Weight: 55309.22

Macromolecule Entities
Molecule Chains Length Organism Details
TRANSTHYRETIN A, B, C, D 127 Rattus norvegicus Gene Name(s): Ttr Tt
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FL8
Query on FL8

B, C 6,4'-DIHYDROXY-3-METHYL-3',5'-DIBROMOFLAVONE
C16 H10 Br2 O4
GKDYOXMZSXVKPP-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.288
  • R-Value Work: 0.203
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 82.54 α = 90.00
b = 82.54 β = 90.00
c = 161.74 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-11-27
  • Released Date: 2002-11-27
  • Deposition author(s): Wojtczak, A., Neumann, P., Muziol, T., Cody, V., Luft, J.R., Pangborn, W.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4