The NMR structure of the 38KDa U1A protein-PIE RNA complex reveals the basis of cooperativity in regulation of polyadenylation by human U1A protein
DOI:10.2210/pdb1dz5/pdb   NDB ID: 1DZ5
1DZ5
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Ribonucleoprotein/rna
    Structure Weight: 37293.98
    Molecule: U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
    Polymer: 1 Type: protein Length: 101
    Chains: A, B
    Fragment: RESIDUES 2-102
    Mutation: YES
    Organism: Homo sapiens
    Gene Name: Gene View for SNRPA
    UniProtKB: Protein Feature View | Search PDB | P09012  
    Molecule: PIE, RNA (5'-R(*GP*AP*GP*AP*CP*AP*UP*UP*GP*CP*AP*CP*CP* CP*GP*GP*AP*GP*UP*CP*UP*C)-3')
    Polymer: 2 Type: rna Length: 22
    Chains: C, D
    Fragment: 3' UTR POLYADENYLATION INHIBITION ELEMENT
    Mutation: YES
    Organism: Homo sapiens
     

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  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct (Homo sapiens)   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1AUD   U1A-UTRRNA, NMR, 31 STRUCTURES 
    1FHT   RNA-BINDING DOMAIN OF THE U1A SPLICEOSOMAL PROTEIN 
    1URN   U1A/RNA COMPLEX 
     
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  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:1DZ5
     
 
Data in orange boxes are gathered from external resources (when available).
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  •   Deposition Summary Hide
    Authors:   Varani, L.,  Gunderson, S.I.,  Mattaj, I.W.,  Kay, L.E.,  Neuhaus, D.,  Varani, G.

    Deposition:   2000-02-16
    Release:   2000-03-29
    Last Modified (REVDAT):   2013-05-15
     
  •   Revision History    Hide
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    2013-05-15
    Citation
    2013-05-15
    Other
    2013-05-15
    Biological assembly
    2013-05-15
    Version format compliance
    2013-05-15
    Polymer description
    2013-05-15
    Secondary structure
    2013-05-15
    Source and taxonomy
    2013-05-15
    Atom nomenclature
    2013-05-15
    Geometry validation
    2013-05-15
    Function and keywords
     
  •   Experimental Details Hide
    Method:   SOLUTION NMR
    Exp. Data:
      NMR Restraints
    NMR Restraint Grid  
    NMR Ensemble
    Conformers Calculated:     50
    Conformers Submitted:     13
    Selection Criteria: AGREEMENT WITH EXPERIMENTAL DATA
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    Method: SOLUTION NMR