4QPO

Mechanistic basis of plasmid-specific DNA binding of the F plasmid regulatory protein, TraM


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.192

Literature

Macromolecules
Sequence Display for 4QPO

Classification: TRANSCRIPTION

Total Structure Weight: 24451.35

Macromolecule Entities
Molecule Chains Length Organism Details
Relaxosome protein TraM A, B, C, D 53 Escherichia coli Gene Name(s): traM ECOK12F071
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

B, C, D PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.192
  • Space Group: H 3

Unit Cell:

Length (Å) Angle (°)
a = 115.68 α = 90.00
b = 115.68 β = 90.00
c = 54.71 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-06-24
  • Released Date: 2014-09-03
  • Deposition author(s): Peng, Y., Lu, J., Wong, J., Edwards, R.A., Frost, L.S., Glover, J.N.M.

Revision History

  • 2014-10-22
    Type: Database references
  • 2014-12-17
    Type: Database references