4G8B

Crystal structures of N-acyl homoserine lactonase AidH S102G mutant complexed with N-hexanoyl homoserine lactone

Structural Biology Knowledgebase: 4G8B SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.3 Å
  • R-Value Free: 0.159
  • R-Value Work: 0.122

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4G8B

Classification: HYDROLASE

Total Structure Weight: 61645.66

Macromolecule Entities
Molecule Chains Length Organism Details
Alpha/beta hydrolase fold protein A, B 279 Ochrobactrum sp. t63 Mutation: S102G
Gene Name(s): aidH

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HL6
Query on HL6

A, B N-[(3S)-2-oxotetrahydrofuran-3-yl]hexanamide
N-hexanoyl-L-homoserine lactone (Synonym)
C10 H17 N O3
ZJFKKPDLNLCPNP-QMMMGPOBSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.3 Å
  • R-Value Free: 0.159
  • R-Value Work: 0.122
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 42.38 α = 90.00
b = 130.07 β = 110.68
c = 44.25 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-07-23
  • Released Date: 2013-01-16
  • Deposition author(s): Liang, D.C., Yan, X.X., Gao, A.

Revision History

No revisions since initial release