3UQA

Crystal structure of a SMT fusion Peptidyl-prolyl cis-trans isomerase with surface mutation A54E from Burkholderia pseudomallei complexed with FK506

Structural Biology Knowledgebase: 3UQA SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.193
  • R-Value Work: 0.182

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3UQA

Classification: Isomerase protein binding

Total Structure Weight: 24005.64

Macromolecule Entities
Molecule Chains Length Organism Details
Ubiquitin-like protein SMT3, Peptidyl-prolyl cis-trans isomerase A 209 Saccharomyces cerevisiae Burkholderia pseudomallei EC#: 5.2.1.8 IUBMB
Fragment: Q12306 residues 13-98, Q3JK38 residues 2-113
Mutation: A54E
Details: Fusion Protein
Gene Name(s): SMT3 YDR510W D9719.15 fbp BPSS1823
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FK5
Query on FK5

A 8-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN
K506 (Synonym)
C44 H69 N O12
QJJXYPPXXYFBGM-LFZNUXCKSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PEG
Query on PEG

A DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 96.31 α = 90.00
b = 31.28 β = 121.57
c = 74.32 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-11-19
  • Released Date: 2011-12-07
  • Deposition author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Revision History

  • 2014-03-19
    Type: Other | Details: --
  • 2014-03-12
    Type: Citation | Details: Citation update