3MME

Structure and functional dissection of PG16, an antibody with broad and potent neutralization of HIV-1

Structural Biology Knowledgebase: 3MME SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.97 Å
  • R-Value Free: 0.317
  • R-Value Work: 0.256

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3MME

Classification: IMMUNE SYSTEM

Total Structure Weight: 147087.35

Macromolecule Entities
Molecule Chains Length Organism Details
PG16 HEAVY CHAIN FAB A, C, H 238 Homo sapiens
PG16 LIGHT CHAIN FAB B, D, L 216 Homo sapiens

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BMA
Query on BMA

L BETA-D-MANNOSE
C6 H12 O6
WQZGKKKJIJFFOK-RWOPYEJCSA-N
Ligand Explorer
 
JSmol
NAG
Query on NAG

B, D, L N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.97 Å
  • R-Value Free: 0.317
  • R-Value Work: 0.256
  • Space Group: C 2 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 191.96 α = 90.00
b = 230.80 β = 90.00
c = 82.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-04-19
  • Released Date: 2010-06-09
  • Deposition author(s): Pancera, M., McLellan, J., Zhou, T., Zhu, J., Kwong, P.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4