2XUM

FACTOR INHIBITING HIF (FIH) Q239H MUTANT IN COMPLEX WITH ZN(II), NOG AND ASP-SUBSTRATE PEPTIDE (20-MER)

Structural Biology Knowledgebase: 2XUM SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.222
  • R-Value Work: 0.201

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2XUM

Classification: OXIDOREDUCTASE / PEPTIDE

Total Structure Weight: 43072.88

Macromolecule Entities
Molecule Chains Length Organism Details
HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR A 349 Homo sapiens EC#: 1.14.11.30 IUBMB 1.14.11.n4 IUBMB
Mutation: Q239H
Gene Name(s): HIF1AN Gene View FIH1
ASP-SUBSTRATE PEPTIDE 2 S 20 Synthetic construct

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
OGA
Query on OGA

A N-OXALYLGLYCINE
C4 H5 N O5
BIMZLRFONYSTPT-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
JSmol
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
OGA Ki: 1200000 nM (99) BindingDB

N/A in BindingMoad
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.222
  • R-Value Work: 0.201
  • Space Group: P 41 21 2

Unit Cell:

Length (Å) Angle (°)
a = 86.35 α = 90.00
b = 86.35 β = 90.00
c = 144.53 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-10-19
  • Released Date: 2010-12-22
  • Deposition author(s): Chowdhury, R., Mcdonough, M.A., Schofield, C.J.

Revision History

  • 2015-03-18
    Type: Data collection | Details: REMARK 200
  • 2011-11-16
    Type: Citation | Details: JRNL
  • 2011-11-16
    Type: Version format compliance | Details: REMARK 4