CRYSTAL STRUCTURE OF THE REGULATORY FRAGMENT OF MAMMALIAN AMPK IN COMPLEXES WITH AMP DOI:10.2210/pdb2v8q/pdb

2V8Q   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Transferase Structure Weight: 66152.97 Molecule: 5'-AMP-ACTIVATED PROTEIN KINASE CATALYTIC SUBUNIT ALPHA-1 Polymer: 1 Type: protein Length: 157 Chains: A EC#: 2.7.11.1    2.7.11.26    2.7.11.27    2.7.11.31    Fragment: RESIDUES 396-548 Organism Rattus norvegicus Gene Names Prkaa1 Ampk1 UniProtKB:   Protein Feature View | Search PDB | P54645     Molecule: 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT BETA-2 Polymer: 2 Type: protein Length: 87 Chains: B Fragment: RESIDUES 187-272 Organism Homo sapiens Gene Name PRKAB2 UniProtKB:   Protein Feature View | Search PDB | O43741     Molecule: 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT GAMMA-1 Polymer: 3 Type: protein Length: 330 Chains: E Organism Rattus norvegicus Gene Name Prkag1 UniProtKB:   Protein Feature View | Search PDB | P80385         Source Hide Polymer: 1 Scientific Name: Rattus norvegicus   Taxonomy   Common Name: Rat Expression System: Escherichia coli   Polymer: 2 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli   Polymer: 3 Scientific Name: Rattus norvegicus   Taxonomy   Common Name: Rat Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 2F15  GLYCOGEN-BINDING DOMAIN OF THE AMP-ACTIVATED PROTEIN KINASEBETA2 SUBUNIT      Ligand Chemical Component Hide Identifier Formula Name Interactions AMP Search  Download  C10 H14 N5 O7 P ADENOSINE MONOPHOSPHATE   Ligand Explorer     External Ligand Annotations Hide Identifier   Binding Affinity (Sequence Identity %) AMP Search  Download  N/A in BindingDB Kd: 24500 nM - data from BindingMOAD   N/A in PDBbind     External Domain Annotations Hide SCOP Classification v1.75: 4 Domains - data from SCOP   Pfam Classification: 4 Domains - data from Pfam   GO Terms: 17 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PQS (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Xiao, B.,  Heath, R.,  Saiu, P.,  Leiper, F.C.,  Leone, P.,  Jing, C.,  Walker, P.A.,  Haire, L.,  Eccleston, J.F.,  Davis, C.T.,  Martin, S.R.,  Carling, D.,  Gamblin, S.J. Deposition:   2007-08-13 Release:   2007-09-25 Last Modified (REVDAT):   2011-07-13     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance 2011-07-13 Flag residual B-value     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.10 R-Value: 0.213 (obs.) R-Free: 0.237 Space Group: P 21 21 21 Unit Cell:   Length [Å] Angles [°] a = 48.52 α = 90.00  b = 119.39 β = 90.00  c = 129.31 γ = 90.00