PDG: N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-D-GLUTAMIC ACID
PDG is a Ligand Of Interest in 8VR5 designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 8VR5_PDG_B_401 | 64% | 52% | 0.154 | 0.955 | 0.84 | 1.02 | - | 1 | 1 | 0 | 100% | 1 |
| 8VR5_PDG_C_401 | 60% | 49% | 0.174 | 0.96 | 0.8 | 1.16 | 1 | 3 | 0 | 0 | 100% | 1 |
| 8VR5_PDG_D_401 | 59% | 38% | 0.191 | 0.974 | 0.96 | 1.51 | - | 4 | 0 | 0 | 100% | 1 |
| 1X2A_PDG_B_1413 | 88% | 2% | 0.101 | 0.978 | 2.39 | 4.33 | 6 | 15 | 0 | 0 | 100% | 1 |
| 4CE5_PDG_B_1181 | 85% | 26% | 0.109 | 0.975 | 1.79 | 1.37 | 4 | 4 | 1 | 0 | 100% | 0.67 |
| 5K8B_PDG_A_501 | 83% | 10% | 0.119 | 0.977 | 2 | 2.51 | 4 | 11 | 6 | 0 | 100% | 1 |
| 2GMU_PDG_A_500 | 73% | 9% | 0.146 | 0.974 | 1.73 | 2.91 | 8 | 11 | 1 | 1 | 100% | 1 |
