TYD: THYMIDINE-5'-DIPHOSPHATE
TYD is a Ligand Of Interest in 6XPV designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6XPV_TYD_G_201 | 65% | 6% | 0.123 | 0.924 | 3.71 | 1.56 | 8 | 3 | 0 | 0 | 100% | 1 |
| 6XPV_TYD_B_201 | 49% | 6% | 0.161 | 0.908 | 3.69 | 1.51 | 8 | 2 | 0 | 0 | 100% | 1 |
| 6XPV_TYD_C_201 | 39% | 6% | 0.152 | 0.86 | 3.69 | 1.55 | 8 | 4 | 0 | 0 | 100% | 0.82 |
| 6XPV_TYD_A_201 | 34% | 6% | 0.177 | 0.86 | 3.7 | 1.57 | 8 | 5 | 0 | 0 | 100% | 0.82 |
| 6XPV_TYD_E_201 | 28% | 6% | 0.179 | 0.832 | 3.7 | 1.56 | 8 | 4 | 1 | 0 | 100% | 0.83 |
| 6XPV_TYD_H_201 | 28% | 6% | 0.203 | 0.854 | 3.69 | 1.59 | 8 | 4 | 0 | 0 | 100% | 0.4 |
| 3OTI_TYD_B_377 | 99% | 25% | 0.054 | 0.987 | 1.12 | 2.08 | 1 | 2 | 0 | 0 | 100% | 1 |
| 3EVO_TYD_A_160 | 99% | 34% | 0.057 | 0.988 | 1 | 1.68 | 1 | 3 | 0 | 0 | 100% | 1 |
| 5WXK_TYD_A_401 | 99% | 35% | 0.06 | 0.987 | 0.99 | 1.64 | 1 | 2 | 0 | 0 | 100% | 1 |
| 3EM1_TYD_B_143 | 98% | 34% | 0.059 | 0.984 | 1.01 | 1.71 | 1 | 3 | 0 | 0 | 100% | 1 |
| 1LVW_TYD_C_3006 | 98% | 9% | 0.057 | 0.978 | 1.68 | 2.93 | 5 | 3 | 0 | 0 | 100% | 1 |
