UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 6INI designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6INI_UDP_A_501 | 93% | 36% | 0.089 | 0.985 | 1.21 | 1.38 | 3 | 5 | 0 | 0 | 100% | 1 |
| 6INH_UDP_A_501 | 95% | 37% | 0.081 | 0.983 | 1.14 | 1.42 | 3 | 6 | 0 | 0 | 100% | 1 |
| 6INF_UDP_A_501 | 94% | 37% | 0.078 | 0.978 | 1.23 | 1.33 | 3 | 6 | 0 | 0 | 100% | 1 |
| 6KVL_UDP_A_501 | 91% | 12% | 0.09 | 0.975 | 1.96 | 2.29 | 6 | 8 | 0 | 0 | 100% | 1 |
| 6O88_UDP_A_500 | 90% | 48% | 0.096 | 0.981 | 1.17 | 0.85 | 1 | 1 | 0 | 0 | 100% | 1 |
| 6O86_UDP_A_500 | 82% | 54% | 0.128 | 0.983 | 1.12 | 0.68 | 1 | - | 0 | 0 | 100% | 1 |
| 4PHR_UDP_A_301 | 100% | 43% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 47% | 0.046 | 0.992 | 1.19 | 0.9 | 2 | 1 | 0 | 0 | 100% | 1 |
| 1GX4_UDP_A_401 | 100% | 20% | 0.046 | 0.991 | 2.39 | 1.19 | 4 | 3 | 0 | 0 | 100% | 1 |
| 5GY7_UDP_B_401 | 99% | 45% | 0.047 | 0.987 | 0.98 | 1.18 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3U2V_UDP_B_270 | 99% | 35% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |
