SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 6DHP designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6DHP_SQD_A_614 | 68% | 20% | 0.129 | 0.949 | 1.09 | 2.46 | 4 | 13 | 0 | 0 | 96% | 0.963 |
| 6DHP_SQD_a_613 | 59% | 30% | 0.132 | 0.915 | 0.95 | 1.93 | 3 | 12 | 0 | 0 | 100% | 1 |
| 6DHP_SQD_F_101 | 51% | 27% | 0.124 | 0.937 | 1.08 | 1.98 | 3 | 9 | 0 | 0 | 67% | 0.6667 |
| 6DHP_SQD_B_624 | 46% | 34% | 0.143 | 0.877 | 0.92 | 1.78 | 3 | 13 | 0 | 0 | 100% | 1 |
| 6DHP_SQD_b_601 | 42% | 27% | 0.134 | 0.868 | 0.98 | 2.07 | 4 | 13 | 0 | 0 | 91% | 0.9074 |
| 6DHP_SQD_A_616 | 30% | 35% | 0.16 | 0.875 | 1.03 | 1.63 | 3 | 3 | 0 | 0 | 72% | 0.7222 |
| 6DHP_SQD_f_101 | 26% | 32% | 0.194 | 0.876 | 1.17 | 1.65 | 5 | 9 | 0 | 0 | 76% | 0.7593 |
| 6DHP_SQD_a_615 | 16% | 37% | 0.177 | 0.809 | 1.12 | 1.45 | 2 | 7 | 0 | 0 | 67% | 0.6667 |
| 5V2C_SQD_a_413 | 94% | 24% | 0.075 | 0.976 | 1.12 | 2.14 | 4 | 12 | 0 | 0 | 100% | 1 |
| 6DHE_SQD_A_412 | 77% | 23% | 0.113 | 0.961 | 1.05 | 2.27 | 5 | 14 | 0 | 0 | 96% | 0.963 |
| 8IRC_SQD_a_411 | 77% | 32% | 0.119 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IR5_SQD_a_411 | 75% | 33% | 0.123 | 0.958 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IRF_SQD_a_410 | 75% | 32% | 0.125 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 0.49 |
| 8IR8_SQD_a_409 | 75% | 33% | 0.126 | 0.96 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 0.4 |
