Ligand validation:5M8N

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5M8N designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5M8N_NAG_D_512	27%	54%	0.23	0.876	0.51	1.27	-	2	0	0	100%	0.9333
5M8N_NAG_C_513	22%	58%	0.188	0.804	0.51	1.09	-	2	1	0	100%	0.9333
5M8N_NAG_A_505	17%	19%	0.247	0.827	2.17	1.48	2	4	0	0	100%	0.9333
5M8N_NAG_A_508	6%	42%	0.258	0.695	1.32	1.01	1	2	0	1	100%	0.9333
5M8N_NAG_B_504	6%	55%	0.288	0.72	0.79	0.95	1	-	2	0	100%	0.9333
5M8N_NAG_D_507	2%	9%	0.303	0.583	2.55	2.06	2	2	0	0	100%	0.9333
5M8R_NAG_A_505	56%	64%	0.14	0.913	0.6	0.76	1	1	0	0	100%	0.9333
5M8S_NAG_C_503	48%	81%	0.129	0.872	0.31	0.5	-	-	0	0	100%	0.9333
5M8T_NAG_A_508	44%	69%	0.174	0.902	0.56	0.6	-	-	0	0	100%	0.9333
5M8L_NAG_C_511	42%	66%	0.159	0.877	0.48	0.79	-	1	0	0	100%	0.9333
5M8Q_NAG_C_511	39%	63%	0.207	0.916	0.67	0.72	1	1	0	0	100%	0.9333
1OC7_NAG_A_500	100%	60%	0.04	0.991	0.61	0.9	-	1	0	0	100%	0.9333
1OC6_NAG_A_500	100%	67%	0.041	0.988	0.46	0.8	-	1	0	0	100%	0.9333
1UWC_NAG_A_262	100%	54%	0.046	0.99	0.81	0.95	-	-	0	0	100%	0.9333
6ZE6_NAG_B_703	99%	52%	0.044	0.984	0.78	1.07	-	2	0	0	100%	0.8667
6ZE2_NAG_B_704	99%	56%	0.042	0.979	0.73	0.95	-	1	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.