Ligand validation:5EKC

NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

NAP is a Ligand Of Interest in 5EKC designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5EKC_NAP_B_500	71%	23%	0.107	0.961	1.93	1.44	10	6	0	0	81%	0.6175
5EKC_NAP_G_500	60%	22%	0.124	0.945	1.91	1.47	9	4	0	0	81%	0.6175
5EKC_NAP_E_500	59%	20%	0.127	0.942	1.92	1.6	10	5	3	0	81%	0.6094
5EKC_NAP_D_500	56%	23%	0.128	0.932	1.89	1.45	8	3	1	0	81%	0.6338
5EKC_NAP_H_500	53%	23%	0.138	0.934	1.88	1.47	10	5	1	0	81%	0.6256
5EKC_NAP_F_500	50%	22%	0.138	0.923	1.89	1.49	9	6	0	0	81%	0.5931
5EKC_NAP_C_500	47%	22%	0.15	0.923	1.89	1.51	9	5	5	0	81%	0.6012
5EKC_NAP_A_500	43%	24%	0.16	0.918	1.87	1.44	10	6	3	0	81%	0.585
5EK6_NAP_G_500	77%	19%	0.132	0.971	2.14	1.49	14	8	3	0	100%	1
5F2C_NAP_B_500	66%	20%	0.114	0.952	1.92	1.65	9	7	0	0	81%	0.6175
5EUY_NAP_A_500	60%	18%	0.129	0.95	2.03	1.64	8	6	0	0	81%	0.7125
2X9G_NAP_B_1269	100%	46%	0.031	0.997	0.96	1.14	1	5	0	0	100%	1
2J8T_NAP_A_1316	100%	49%	0.033	0.996	0.97	1.01	3	2	1	0	100%	1
3LQL_NAP_A_500	100%	44%	0.035	0.996	1.13	1.07	3	4	1	0	100%	1
3LD5_NAP_A_500	100%	33%	0.033	0.993	1.34	1.4	7	6	2	0	100%	1
3M4H_NAP_A_500	100%	45%	0.037	0.997	1.12	1.04	5	3	1	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.