TYD: THYMIDINE-5'-DIPHOSPHATE
TYD is a Ligand Of Interest in 4ZU7 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4ZU7_TYD_A_201 | 77% | 25% | 0.111 | 0.95 | 1.16 | 2 | 1 | 4 | 0 | 0 | 100% | 1 |
| 4ZU7_TYD_D_201 | 73% | 28% | 0.116 | 0.943 | 1.15 | 1.88 | 2 | 1 | 0 | 0 | 100% | 1 |
| 4ZU7_TYD_B_201 | 67% | 27% | 0.121 | 0.93 | 1 | 2.08 | 1 | 3 | 2 | 0 | 100% | 1 |
| 4ZU7_TYD_F_201 | 62% | 28% | 0.128 | 0.922 | 1.11 | 1.93 | 1 | 3 | 1 | 0 | 100% | 1 |
| 4ZU7_TYD_C_201 | 61% | 30% | 0.125 | 0.915 | 0.93 | 1.97 | 1 | 2 | 1 | 0 | 100% | 1 |
| 4ZU7_TYD_E_201 | 61% | 30% | 0.13 | 0.92 | 1.09 | 1.8 | 1 | 3 | 2 | 0 | 100% | 1 |
| 4ZU7_TYD_H_201 | 47% | 31% | 0.171 | 0.911 | 1.08 | 1.76 | 1 | 1 | 1 | 0 | 100% | 1 |
| 4ZU7_TYD_G_201 | 41% | 32% | 0.162 | 0.878 | 0.98 | 1.82 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4O9E_TYD_A_201 | 89% | 37% | 0.093 | 0.971 | 0.71 | 1.81 | - | 5 | 0 | 0 | 100% | 1 |
| 3OTI_TYD_B_377 | 99% | 25% | 0.054 | 0.987 | 1.12 | 2.08 | 1 | 2 | 0 | 0 | 100% | 1 |
| 3EVO_TYD_A_160 | 99% | 34% | 0.057 | 0.988 | 1 | 1.68 | 1 | 3 | 0 | 0 | 100% | 1 |
| 5WXK_TYD_A_401 | 99% | 35% | 0.06 | 0.987 | 0.99 | 1.64 | 1 | 2 | 0 | 0 | 100% | 1 |
| 3EM1_TYD_B_143 | 98% | 34% | 0.059 | 0.984 | 1.01 | 1.71 | 1 | 3 | 0 | 0 | 100% | 1 |
| 1LVW_TYD_C_3006 | 98% | 9% | 0.057 | 0.978 | 1.68 | 2.93 | 5 | 3 | 0 | 0 | 100% | 1 |
