GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 4W29 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4W29_GDP_CY_701 | 47% | 29% | 0.143 | 0.882 | 1.3 | 1.69 | 3 | 8 | 0 | 0 | 100% | 1 |
| 4W29_GDP_AY_701 | 15% | 26% | 0.236 | 0.796 | 1.37 | 1.76 | 4 | 8 | 0 | 0 | 100% | 1 |
| 4WQU_GDP_BZ_702 | 79% | 40% | 0.123 | 0.971 | 0.95 | 1.42 | - | 4 | 5 | 0 | 100% | 0.9925 |
| 1FNM_GDP_A_900 | 79% | 21% | 0.129 | 0.977 | 1.29 | 2.16 | 3 | 7 | 1 | 0 | 100% | 1 |
| 5HAU_GDP_1z_701 | 76% | 41% | 0.139 | 0.975 | 0.92 | 1.43 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4WPO_GDP_BZ_702 | 75% | 39% | 0.135 | 0.969 | 1.03 | 1.42 | 1 | 5 | 6 | 0 | 100% | 0.9864 |
| 2EFG_GDP_A_900 | 72% | 31% | 0.155 | 0.981 | 1.68 | 1.2 | 5 | 3 | 1 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 19% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 8CNJ_GDP_B_201 | 100% | 56% | 0.04 | 0.992 | 0.91 | 0.77 | 1 | - | 0 | 0 | 100% | 1 |
| 5UQW_GDP_A_1002 | 100% | 47% | 0.04 | 0.99 | 1.04 | 1.01 | 2 | 2 | 0 | 0 | 100% | 1 |
| 2PHN_GDP_A_2696 | 100% | 45% | 0.046 | 0.99 | 1.08 | 1.08 | 1 | 2 | 0 | 0 | 100% | 1 |
