Ligand validation:4G88

API: 2,6-DIAMINOPIMELIC ACID

API is a Ligand Of Interest in 4G88 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4G88_API_A_401	89%	31%	0.082	0.96	1.42	1.44	2	4	0	0	100%	1
4G88_API_G_401	86%	59%	0.088	0.958	0.61	0.94	-	1	0	0	100%	1
4G88_API_H_401	83%	32%	0.093	0.95	1.39	1.44	2	3	0	0	100%	1
4G88_API_F_401	66%	57%	0.125	0.931	0.67	0.98	-	1	0	0	100%	1
4G88_API_B_401	63%	19%	0.113	0.908	1.83	1.81	4	4	0	0	100%	1
4G88_API_D_401	61%	19%	0.124	0.914	1.79	1.86	4	5	1	0	100%	1
4G88_API_E_401	59%	31%	0.138	0.922	1.32	1.54	2	4	0	0	100%	1
4G88_API_C_401	8%	30%	0.303	0.772	1.3	1.6	2	3	4	0	100%	1
3TD4_API_B_401	77%	34%	0.116	0.955	1.29	1.43	2	2	1	0	100%	1
2DAP_API_A_902	99%	8%	0.052	0.983	2.2	2.59	6	6	1	0	100%	1
5M47_API_A_301	83%	33%	0.118	0.977	1.01	1.72	1	5	1	0	100%	1
5LKW_API_A_201	69%	31%	0.099	0.969	0.68	2.15	-	4	1	0	69%	0.6923
4Q6Q_API_A_505	68%	42%	0.122	0.933	1.04	1.27	-	1	1	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.