Ligand validation:3VVK

RET: RETINAL

RET is a Ligand Of Interest in 3VVK designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3VVK_RET_B_301	64%	20%	0.137	0.935	1.63	1.88	4	11	0	0	100%	0.6095
3VVK_RET_A_301	61%	14%	0.154	0.943	2.5	1.57	6	6	0	0	100%	0.4952
3VVK_RET_D_301	60%	13%	0.155	0.943	2.56	1.59	6	7	0	0	100%	0.419
3VVK_RET_E_301	58%	13%	0.17	0.951	2.67	1.49	6	7	0	0	100%	0.419
3VVK_RET_F_301	53%	14%	0.162	0.924	2.71	1.4	6	5	1	0	100%	0.419
3VVK_RET_C_301	49%	19%	0.154	0.902	1.61	2.03	4	10	0	0	100%	0.5333
3QBG_RET_B_292	86%	15%	0.084	0.952	2.25	1.7	6	6	1	0	100%	0.9524
5B0W_RET_B_301	82%	18%	0.103	0.958	2.16	1.56	6	7	5	0	100%	0.3619
3QBK_RET_B_292	80%	17%	0.113	0.963	2.28	1.55	5	5	0	0	100%	0.9524
3A7K_RET_B_292	80%	15%	0.115	0.963	2.23	1.69	5	5	0	0	100%	0.9524
5ETZ_RET_B_301	79%	16%	0.102	0.949	2.18	1.68	6	7	1	0	100%	0.9524
7XJE_RET_A_301	99%	7%	0.048	0.983	1.99	2.98	4	14	1	0	100%	0.9524
7XJC_RET_A_301	97%	11%	0.067	0.98	1.93	2.43	2	14	0	0	100%	0.7752
7XJD_RET_A_301	97%	11%	0.06	0.972	1.93	2.42	2	14	0	0	100%	0.9524
5ZIN_RET_A_250	96%	7%	0.054	0.964	2.81	2.16	4	10	0	0	100%	0.9524
6TK7_RET_A_301	96%	62%	0.059	0.967	0.85	0.59	1	-	1	0	100%	0.9524

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.