GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 3T1O designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3T1O_GDP_A_274 | 94% | 34% | 0.085 | 0.983 | 1.28 | 1.43 | 2 | 7 | 0 | 0 | 100% | 1 |
| 3T1O_GDP_B_274 | 92% | 34% | 0.093 | 0.985 | 1.48 | 1.22 | 4 | 5 | 1 | 0 | 100% | 1 |
| 3T1T_GDP_A_274 | 93% | 14% | 0.085 | 0.982 | 1.74 | 2.28 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3T12_GDP_A_197 | 91% | 37% | 0.095 | 0.983 | 1.1 | 1.46 | 2 | 5 | 1 | 0 | 100% | 1 |
| 3T1V_GDP_A_274 | 84% | 22% | 0.116 | 0.979 | 1.35 | 2.06 | 3 | 8 | 1 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 19% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 8CNJ_GDP_B_201 | 100% | 56% | 0.04 | 0.992 | 0.91 | 0.77 | 1 | - | 0 | 0 | 100% | 1 |
| 5UQW_GDP_A_1002 | 100% | 47% | 0.04 | 0.99 | 1.04 | 1.01 | 2 | 2 | 0 | 0 | 100% | 1 |
| 2PHN_GDP_A_2696 | 100% | 45% | 0.046 | 0.99 | 1.08 | 1.08 | 1 | 2 | 0 | 0 | 100% | 1 |
