UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 3QKW designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3QKW_UDP_B_400 | 89% | 35% | 0.103 | 0.981 | 1 | 1.66 | 1 | 8 | 0 | 0 | 100% | 1 |
| 3QKW_UDP_A_400 | 87% | 36% | 0.107 | 0.978 | 1.01 | 1.56 | 1 | 7 | 0 | 0 | 100% | 1 |
| 3QKW_UDP_D_400 | 85% | 35% | 0.112 | 0.979 | 0.92 | 1.7 | - | 8 | 0 | 0 | 100% | 1 |
| 3QKW_UDP_C_400 | 84% | 36% | 0.114 | 0.977 | 0.97 | 1.61 | - | 8 | 0 | 0 | 100% | 1 |
| 3RHZ_UDP_A_7517 | 92% | 40% | 0.086 | 0.977 | 0.88 | 1.5 | - | 6 | 0 | 0 | 100% | 1 |
| 4PHR_UDP_A_301 | 100% | 43% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 47% | 0.046 | 0.992 | 1.19 | 0.9 | 2 | 1 | 0 | 0 | 100% | 1 |
| 1GX4_UDP_A_401 | 100% | 20% | 0.046 | 0.991 | 2.39 | 1.19 | 4 | 3 | 0 | 0 | 100% | 1 |
| 5GY7_UDP_B_401 | 99% | 45% | 0.047 | 0.987 | 0.98 | 1.18 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3U2V_UDP_B_270 | 99% | 35% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |
