D5M: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE

D5M is a Ligand Of Interest in 3KIC designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3KIC_D5M_J_999 51% 44% 0.191 0.9450.92 1.3 1 310100%0.7
3KIC_D5M_P_999 45% 44% 0.191 0.9240.91 1.3 1 210100%0.7
3KIC_D5M_C_999 44% 44% 0.216 0.9450.91 1.3 1 320100%0.7
3KIC_D5M_Q_999 42% 44% 0.219 0.9410.91 1.31 1 310100%0.7
3KIC_D5M_K_999 42% 44% 0.194 0.9150.91 1.3 1 220100%0.7
3KIC_D5M_A_999 40% 44% 0.228 0.9420.91 1.3 1 310100%0.7
3KIC_D5M_S_999 40% 44% 0.22 0.9320.9 1.31 1 310100%0.7
3KIC_D5M_G_999 37% 44% 0.233 0.9330.91 1.3 1 220100%0.7
3KIC_D5M_I_999 37% 44% 0.231 0.9290.91 1.3 1 210100%0.7
3KIC_D5M_H_999 34% 44% 0.246 0.9330.91 1.3 1 320100%0.7
3KIC_D5M_O_999 34% 44% 0.257 0.9440.91 1.3 1 320100%0.7
3KIC_D5M_B_999 33% 44% 0.249 0.9310.91 1.31 1 220100%0.7
3KIC_D5M_R_999 33% 44% 0.247 0.9250.91 1.3 1 210100%0.7
3KIC_D5M_L_999 32% 44% 0.265 0.940.91 1.31 1 320100%0.7
3KIC_D5M_F_999 31% 44% 0.257 0.930.91 1.3 1 220100%0.7
3KIC_D5M_D_999 31% 44% 0.233 0.9050.92 1.3 1 220100%0.7
3KIC_D5M_T_999 23% 44% 0.3 0.9240.91 1.31 1 320100%0.7
3KIC_D5M_N_999 22% 44% 0.279 0.8990.91 1.31 1 320100%0.7
3KIC_D5M_M_999 22% 44% 0.313 0.9330.91 1.31 1 320100%0.7
3KIC_D5M_E_999 16% 44% 0.299 0.8660.92 1.3 1 220100%0.7
3KIE_D5M_T_999 20% 47% 0.29 0.8930.93 1.15 2 230100%0.73
6B42_D5M_A_201 98% 52% 0.066 0.9860.82 1.04 1 200100%1
8HCG_D5M_A_306 95% 34% 0.078 0.9821.69 1.02 7 100100%1
2IOC_D5M_B_303 85% 14% 0.091 0.9552.71 1.35 3 200100%1
7A1F_D5M_A_403 74% 6% 0.122 0.9533.2 2.13 7 410100%1
2QRO_D5M_A_503 59% 35% 0.174 0.9580.93 1.73 1 460100%1