GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 3GJ6 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3GJ6_GDP_A_302 | 63% | 47% | 0.17 | 0.967 | 0.96 | 1.1 | 1 | 3 | 0 | 0 | 100% | 1 |
| 3GJ0_GDP_A_302 | 99% | 49% | 0.061 | 0.988 | 1 | 0.99 | 1 | 1 | 0 | 0 | 100% | 1 |
| 5CIW_GDP_A_301 | 98% | 41% | 0.06 | 0.983 | 0.85 | 1.48 | - | 3 | 0 | 0 | 100% | 1 |
| 3GJ8_GDP_A_302 | 98% | 48% | 0.067 | 0.987 | 0.94 | 1.08 | 1 | 3 | 0 | 0 | 100% | 1 |
| 5CIQ_GDP_A_301 | 97% | 42% | 0.068 | 0.983 | 1 | 1.29 | 1 | 4 | 0 | 0 | 100% | 1 |
| 5CIT_GDP_A_301 | 95% | 39% | 0.073 | 0.979 | 1.1 | 1.32 | 3 | 5 | 1 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 19% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 8CNJ_GDP_B_201 | 100% | 56% | 0.04 | 0.992 | 0.91 | 0.77 | 1 | - | 0 | 0 | 100% | 1 |
| 5UQW_GDP_A_1002 | 100% | 47% | 0.04 | 0.99 | 1.04 | 1.01 | 2 | 2 | 0 | 0 | 100% | 1 |
| 2PHN_GDP_A_2696 | 100% | 45% | 0.046 | 0.99 | 1.08 | 1.08 | 1 | 2 | 0 | 0 | 100% | 1 |
