Ligand validation:2VSM

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 2VSM designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
2VSM_NAG_A_1605	65%	51%	0.126	0.927	0.61	1.26	-	2	2	0	100%	0.9333
2VSM_NAG_A_1607	42%	49%	0.184	0.906	0.55	1.42	-	3	0	0	100%	0.9333
2VSM_NAG_A_1606	33%	31%	0.185	0.863	0.66	2.2	-	6	0	0	100%	0.9333
2VSM_NAG_B_1171	20%	36%	0.243	0.846	0.65	1.94	-	2	1	0	100%	0.9333
2VWD_NAG_B_1611	86%	62%	0.093	0.962	0.56	0.86	-	-	0	0	100%	0.9333
3D12_NAG_A_1210	16%	24%	0.297	0.867	1.69	1.58	3	3	0	0	100%	0.9333
3D11_NAG_A_1210	1%	53%	0.532	0.729	0.47	1.32	-	3	1	1	100%	0.9333
1OC7_NAG_A_500	100%	60%	0.04	0.991	0.61	0.9	-	1	0	0	100%	0.9333
1OC6_NAG_A_500	100%	67%	0.041	0.988	0.46	0.8	-	1	0	0	100%	0.9333
1UWC_NAG_A_262	100%	54%	0.046	0.99	0.81	0.95	-	-	0	0	100%	0.9333
6ZE6_NAG_B_703	99%	52%	0.044	0.984	0.78	1.07	-	2	0	0	100%	0.8667
6ZE2_NAG_B_704	99%	56%	0.042	0.979	0.73	0.95	-	1	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.