TDK: 3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-{(1S)-1-HYDROXY-1-[(R)-HYDROXY(METHOXY)PHOSPHORYL]ETHYL}-5-(2-{[(S)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM
TDK is a Ligand Of Interest in 2G25 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2G25_TDK_B_887 | 85% | 22% | 0.103 | 0.969 | 1.67 | 1.77 | 5 | 8 | 3 | 0 | 100% | 1 |
| 2G25_TDK_A_887 | 84% | 21% | 0.109 | 0.973 | 1.74 | 1.72 | 4 | 8 | 1 | 0 | 100% | 1 |
| 2EZ9_TDK_B_1613 | 94% | 22% | 0.071 | 0.971 | 1.35 | 2.08 | 5 | 10 | 1 | 0 | 100% | 1 |
| 6OUV_TDK_A_701 | 90% | 66% | 0.104 | 0.988 | 0.41 | 0.86 | - | 1 | 0 | 0 | 100% | 0.9529 |
| 8BEO_TDK_A_604 | 87% | 3% | 0.107 | 0.981 | 3.03 | 3.24 | 6 | 9 | 5 | 0 | 100% | 1 |
| 2G28_TDK_B_887 | 66% | 20% | 0.12 | 0.924 | 1.92 | 1.66 | 4 | 8 | 4 | 0 | 100% | 1 |
| 2QTC_TDK_A_887 | 41% | 20% | 0.155 | 0.868 | 1.97 | 1.6 | 3 | 7 | 6 | 0 | 100% | 1 |
