8TG7

Structure of Red beta C-terminal domain in complex with SSB C-terminal peptide, Form 2


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP8.62982.0 M ammonium sulfate, 0.1 M Tris pH 8.6
Crystal Properties
Matthews coefficientSolvent content
2.1843.56

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 38.313α = 90
b = 69.222β = 90
c = 70.536γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS3 S 6MKB mirrors, fixed focus2020-08-05MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 31-ID0.9793APS31-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)Rpim I (All)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.77549.4186.50.0550.060.0240.99915.16.316243
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)Rpim I (All)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.7751.89125.51.3991.5160.5760.6591.36.8

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTFREE R-VALUE1.77549.4051624388186.450.1840.18160.234140.411
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.04-0.0810.04
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg16.272
r_dihedral_angle_6_deg12.726
r_lrange_it9.577
r_lrange_other9.576
r_scangle_it8.623
r_scangle_other8.618
r_dihedral_angle_1_deg6.885
r_scbond_it5.53
r_scbond_other5.526
r_mcangle_other4.894
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg16.272
r_dihedral_angle_6_deg12.726
r_lrange_it9.577
r_lrange_other9.576
r_scangle_it8.623
r_scangle_other8.618
r_dihedral_angle_1_deg6.885
r_scbond_it5.53
r_scbond_other5.526
r_mcangle_other4.894
r_mcangle_it4.881
r_dihedral_angle_2_deg4.465
r_mcbond_it3.75
r_mcbond_other3.738
r_angle_refined_deg1.472
r_angle_other_deg0.488
r_nbd_refined0.212
r_nbd_other0.21
r_symmetry_nbd_refined0.195
r_nbtor_refined0.179
r_symmetry_nbd_other0.177
r_xyhbond_nbd_refined0.172
r_symmetry_xyhbond_nbd_refined0.104
r_symmetry_nbtor_other0.079
r_chiral_restr0.073
r_bond_refined_d0.009
r_symmetry_xyhbond_nbd_other0.008
r_gen_planes_refined0.007
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1224
Nucleic Acid Atoms
Solvent Atoms97
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
autoPROCdata reduction
Aimlessdata scaling
MOLREPphasing