8P3A

bacteriophage T5 l-alanoyl-d-glutamate peptidase Zn2+/Ca2+ form


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.8 mM [U-100% 13C; U-100% 15N] l-alanoyl-d-glutamate peptidase, 50 mM [U-100% 2H] sodium acetate, 3 mM Zn(NO3)2, 3 mM CaCl2, 0.03 % sodium azide90% H2O/10% D2O50 mM4.1AMBIENT atm298Bruker AVANCE III 600
22D 1H-13C HSQC0.8 mM [U-100% 13C; U-100% 15N] l-alanoyl-d-glutamate peptidase, 50 mM [U-100% 2H] sodium acetate, 3 mM Zn(NO3)2, 3 mM CaCl2, 0.03 % sodium azide90% H2O/10% D2O50 mM4.1AMBIENT atm298Bruker AVANCE III 600
33D HNCACB0.8 mM [U-100% 13C; U-100% 15N] l-alanoyl-d-glutamate peptidase, 50 mM [U-100% 2H] sodium acetate, 3 mM Zn(NO3)2, 3 mM CaCl2, 0.03 % sodium azide90% H2O/10% D2O50 mM4.1AMBIENT atm298Bruker AVANCE III 600
43D CBCA(CO)NH0.8 mM [U-100% 13C; U-100% 15N] l-alanoyl-d-glutamate peptidase, 50 mM [U-100% 2H] sodium acetate, 3 mM Zn(NO3)2, 3 mM CaCl2, 0.03 % sodium azide90% H2O/10% D2O50 mM4.1AMBIENT atm298Bruker AVANCE III 600
53D C(CO)NH0.8 mM [U-100% 13C; U-100% 15N] l-alanoyl-d-glutamate peptidase, 50 mM [U-100% 2H] sodium acetate, 3 mM Zn(NO3)2, 3 mM CaCl2, 0.03 % sodium azide90% H2O/10% D2O50 mM4.1AMBIENT atm298Bruker AVANCE III 600
63D 1H-15N TOCSY0.8 mM [U-100% 13C; U-100% 15N] l-alanoyl-d-glutamate peptidase, 50 mM [U-100% 2H] sodium acetate, 3 mM Zn(NO3)2, 3 mM CaCl2, 0.03 % sodium azide90% H2O/10% D2O50 mM4.1AMBIENT atm298Bruker AVANCE III 600
73D HCCH-TOCSY0.8 mM [U-100% 13C; U-100% 15N] l-alanoyl-d-glutamate peptidase, 50 mM [U-100% 2H] sodium acetate, 3 mM Zn(NO3)2, 3 mM CaCl2, 0.03 % sodium azide90% H2O/10% D2O50 mM4.1AMBIENT atm298Bruker AVANCE III 600
82D CBHD0.8 mM [U-100% 13C; U-100% 15N] l-alanoyl-d-glutamate peptidase, 50 mM [U-100% 2H] sodium acetate, 3 mM Zn(NO3)2, 3 mM CaCl2, 0.03 % sodium azide90% H2O/10% D2O50 mM4.1AMBIENT atm298Bruker AVANCE III 600
123D HNCO0.8 mM [U-100% 13C; U-100% 15N] l-alanoyl-d-glutamate peptidase, 50 mM [U-100% 2H] sodium acetate, 3 mM Zn(NO3)2, 3 mM CaCl2, 0.03 % sodium azide90% H2O/10% D2O50 mM4.1AMBIENT atm298Bruker AVANCE III 600
112D 1H-13C HSQC aromatic0.8 mM [U-100% 13C; U-100% 15N] l-alanoyl-d-glutamate peptidase, 50 mM [U-100% 2H] sodium acetate, 3 mM Zn(NO3)2, 3 mM CaCl2, 0.03 % sodium azide90% H2O/10% D2O50 mM4.1AMBIENT atm298Bruker AVANCE III 600
103D 1H-13C NOESY aliphatic0.8 mM [U-100% 13C; U-100% 15N] l-alanoyl-d-glutamate peptidase, 50 mM [U-100% 2H] sodium acetate, 3 mM Zn(NO3)2, 3 mM CaCl2, 0.03 % sodium azide90% H2O/10% D2O50 mM4.1AMBIENT atm298Bruker AVANCE III 600
93D 1H-15N NOESY0.8 mM [U-100% 13C; U-100% 15N] l-alanoyl-d-glutamate peptidase, 50 mM [U-100% 2H] sodium acetate, 3 mM Zn(NO3)2, 3 mM CaCl2, 0.03 % sodium azide90% H2O/10% D2O50 mM4.1AMBIENT atm298Bruker AVANCE III 600
133D HN(CO)CA0.8 mM [U-100% 13C; U-100% 15N] l-alanoyl-d-glutamate peptidase, 50 mM [U-100% 2H] sodium acetate, 3 mM Zn(NO3)2, 3 mM CaCl2, 0.03 % sodium azide90% H2O/10% D2O50 mM4.1AMBIENT atm298Bruker AVANCE III 600
143D 1H-13C NOESY aromatic0.8 mM [U-100% 13C; U-100% 15N] l-alanoyl-d-glutamate peptidase, 50 mM [U-100% 2H] sodium acetate, 3 mM Zn(NO3)2, 3 mM CaCl2, 0.03 % sodium azide90% H2O/10% D2O50 mM4.1AMBIENT atm298Bruker AVANCE III 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III600
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsCYANA
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (target function)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure calculationCYANA2.1Guntert, Mumenthaler and Wuthrich
2refinementCYANA2.1Guntert, Mumenthaler and Wuthrich
3chemical shift assignmentCARARelease: 1.8.4.2Keller and Wuthrich
4processingTopSpin2.1Bruker Biospin
5peak pickingTopSpin2.1Bruker Biospin