X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP6.52980.2M Ammonium sulphate, 0.1M MES monohydrate, 30% w/v PEG MME
Crystal Properties
Matthews coefficientSolvent content
3.4464.21

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 78.38α = 90
b = 78.38β = 90
c = 78.38γ = 90
Symmetry
Space GroupI 21 3

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATEMAR scanner 345 mm plate2022-05-12MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONRRCAT INDUS-2 BEAMLINE PX-BL210.978RRCAT INDUS-2PX-BL21

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Rrim I (All)Rpim I (All)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.6424.899.50.1170.030.99918.815.39939
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Rrim I (All)Rpim I (All)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.641.7396.50.7570.2010.85813.5

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTFREE R-VALUE1.6424.798993843999.4990.1530.15290.164816.8
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.839
r_dihedral_angle_3_deg16.57
r_dihedral_angle_4_deg13.957
r_dihedral_angle_1_deg7.487
r_lrange_it6.26
r_lrange_other6.26
r_scangle_it4.145
r_scangle_other3.911
r_scbond_it2.697
r_angle_refined_deg2.632
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.839
r_dihedral_angle_3_deg16.57
r_dihedral_angle_4_deg13.957
r_dihedral_angle_1_deg7.487
r_lrange_it6.26
r_lrange_other6.26
r_scangle_it4.145
r_scangle_other3.911
r_scbond_it2.697
r_angle_refined_deg2.632
r_scbond_other2.528
r_mcangle_other2.368
r_mcangle_it2.363
r_angle_other_deg1.655
r_mcbond_it1.476
r_mcbond_other1.424
r_nbd_other0.22
r_symmetry_xyhbond_nbd_refined0.211
r_nbd_refined0.208
r_nbtor_refined0.187
r_symmetry_nbd_other0.186
r_xyhbond_nbd_refined0.154
r_chiral_restr0.134
r_symmetry_nbd_refined0.107
r_symmetry_nbtor_other0.092
r_symmetry_xyhbond_nbd_other0.057
r_bond_refined_d0.021
r_gen_planes_refined0.015
r_gen_planes_other0.002
r_bond_other_d0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms404
Nucleic Acid Atoms
Solvent Atoms36
Heterogen Atoms10

Software

Software
Software NamePurpose
REFMACrefinement
iMOSFLMdata reduction
SCALAdata scaling
MOLREPphasing