8G3R

N2 neuraminidase of A/Tanzania/205/2010 H3N2 with S245N S247T mutations in complex with one FNI17 Fab molecule


ELECTRON MICROSCOPY

Refinement

RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.235
r_dihedral_angle_4_deg18.77
r_long_range_B_refined15.347
r_long_range_B_other15.347
r_dihedral_angle_3_deg12.199
r_scangle_other9.006
r_dihedral_angle_1_deg8.834
r_mcangle_other6.978
r_mcangle_it6.977
r_scbond_it5.341
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.235
r_dihedral_angle_4_deg18.77
r_long_range_B_refined15.347
r_long_range_B_other15.347
r_dihedral_angle_3_deg12.199
r_scangle_other9.006
r_dihedral_angle_1_deg8.834
r_mcangle_other6.978
r_mcangle_it6.977
r_scbond_it5.341
r_scbond_other5.341
r_mcbond_it4.354
r_mcbond_other4.351
r_angle_refined_deg1.701
r_angle_other_deg1.391
r_chiral_restr0.088
r_bond_other_d0.032
r_bond_refined_d0.01
r_gen_planes_refined0.009
r_gen_planes_other0.002
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Sample
One FNI17 Fab in complex with tetrameric N2 NA protein from A/Tanzania/2010 strain with S245N S247T mutations
Specimen Preparation
Sample Aggregation StatePARTICLE
Vitrification Instrument
Cryogen NameETHANE
Sample Vitrification Details
3D Reconstruction
Reconstruction MethodSINGLE PARTICLE
Number of Particles528681
Reported Resolution (Å)2.3
Resolution MethodFSC 0.143 CUT-OFF
Other Details
Refinement Type
Symmetry TypePOINT
Point SymmetryC1
Map-Model Fitting and Refinement
Id1
Refinement Space
Refinement Protocol
Refinement Target
Overall B Value
Fitting Procedure
Details
Data Acquisition
Detector TypeGATAN K3 (6k x 4k)
Electron Dose (electrons/Å**2)53.81
Imaging Experiment1
Date of Experiment
Temperature (Kelvin)
Microscope ModelTFS KRIOS
Minimum Defocus (nm)1200
Maximum Defocus (nm)1500
Minimum Tilt Angle (degrees)
Maximum Tilt Angle (degrees)
Nominal CS
Imaging ModeBRIGHT FIELD
Specimen Holder Model
Nominal Magnification
Calibrated Magnification
SourceFIELD EMISSION GUN
Acceleration Voltage (kV)300
Imaging Details
Image Processing
CTF Correction TypeCTF Correction DetailsNumber of Particles SelectedParticle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION