8CHI

Human FKBP12 in complex with (1S,5S,6R)-10-((S)-3,5-dichloro-N-methylphenylsulfonimidoyl)-3-(pyridin-2-ylmethyl)-5-vinyl-3,10-diazabicyclo[4.3.1]decan-2-one

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP		293	1.4M Na/K tartrate, 0.2 M ammonium citrate, 0.1M MES pH 6.5

Crystal Properties
Matthews coefficient	Solvent content
3.3	62.72

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 69.361	α = 90
b = 69.361	β = 90
c = 129.848	γ = 90

Symmetry
Space Group	P 41 21 2

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS3 S 2M		2021-07-17	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	BESSY BEAMLINE 14.2	0.918400	BESSY	14.2

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.7	47.444	100	0.114	0.118	0.032	1	22.2	25.7		35735

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.7	1.73			1.776	1.842	0.488	0.732		27.2

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	THROUGHOUT	1.7	47.444	35656	1703	99.978	0.18	0.178	0.2144	21.329

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.107			-0.107		0.214

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_6_deg	15.543
r_dihedral_angle_3_deg	14.511
r_dihedral_angle_2_deg	10.431
r_dihedral_angle_1_deg	7.295
r_lrange_it	5.91
r_lrange_other	5.78
r_scangle_it	4.589
r_scangle_other	4.587
r_scbond_other	3.288
r_scbond_it	3.286
r_mcangle_it	2.992
r_mcangle_other	2.991
r_mcbond_other	2.119
r_mcbond_it	2.118
r_chiral_restr_other	1.979
r_angle_refined_deg	1.799
r_angle_other_deg	0.824
r_nbd_refined	0.222
r_symmetry_nbd_refined	0.214
r_symmetry_nbd_other	0.195
r_nbd_other	0.19
r_nbtor_refined	0.18
r_xyhbond_nbd_refined	0.177
r_chiral_restr	0.139
r_ncsr_local_group_1	0.137
r_symmetry_xyhbond_nbd_refined	0.132
r_symmetry_xyhbond_nbd_other	0.094
r_symmetry_nbtor_other	0.089
r_bond_refined_d	0.014
r_gen_planes_refined	0.011
r_bond_other_d	0.005
r_gen_planes_other	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	1628
Nucleic Acid Atoms
Solvent Atoms	253
Heterogen Atoms	68

Software

Software
Software Name	Purpose
REFMAC	refinement
XDS	data reduction
Aimless	data scaling
PHASER	phasing