8ACZ

Solid-State NMR Atomic-Resolution Structure of the Protein Encoded by Gene V of fd Bacteriophage in Complex with Viral ssDNA

SOLID-STATE NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D DARR15ms	200 g/L [U-100% 13C; U-100% 15N] gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
2	2D DARR100ms	200 g/L [U-100% 13C; U-100% 15N] gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
3	2D DARR50ms	200 g/L [1,3-13C]-glycerol gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
4	2D DARR100ms	200 g/L [1,3-13C]-glycerol gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
5	2D DARR150ms	200 g/L [1,3-13C]-glycerol gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
8	2D CORD150ms	200 g/L [1,3-13C]-glycerol gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
7	2D DARR300ms	200 g/L [1,3-13C]-glycerol gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
6	2D CORD300ms	200 g/L [1,3-13C]-glycerol gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
9	2D DARR300ms #2	200 g/L [1,3-13C]-glycerol gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
10	2D CHHC150u	200 g/L [1,3-13C]-glycerol gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
11	2D CHHC300u	200 g/L [1,3-13C]-glycerol gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
12	2D DARR5ms	200 g/L [U-100% 13C; U-100% 15N] gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
13	2D DARR250ms	200 g/L [U-100% 13C; U-100% 15N] gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
14	2D RFDR6	200 g/L [U-100% 13C; U-100% 15N] gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
15	2D INADEQUATE	200 g/L [U-100% 13C; U-100% 15N] gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
16	3D NCOCX25	200 g/L [U-100% 13C; U-100% 15N] gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
17	3D NCACX25	200 g/L [U-100% 13C; U-100% 15N] gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
18	2D DARR5ms	200 g/L [1,3-13C]-glycerol gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
19	2D DARR15ms	200 g/L [1,3-13C]-glycerol gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
20	2D NCA	200 g/L [1,3-13C]-glycerol gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
21	2D NCO	200 g/L [1,3-13C]-glycerol gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
22	3D NCOCX100	200 g/L [1,3-13C]-glycerol gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600
23	3D NCACX100	200 g/L [1,3-13C]-glycerol gVp of fd bacteriophage in complex with the viral ssDNA, 22 g/L ssDNA of fd phage	200mM NaCl, 1mM EDTA and 10mM Tris-HCl	200mM NaCl mM	7.4	1 atm	263	Bruker AVANCE III 600

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III	600

NMR Refinement
Method	Details	Software
simulated annealing		X-PLOR NIH

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	11
Representative Model	1 (minimized average structure)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore
2	structure calculation	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore
3	chemical shift assignment	NMRFAM-SPARKY	1.470	Lee W, Tonelli M, Markley JL.
4	peak picking	NMRFAM-SPARKY	1.470	Lee W, Tonelli M, Markley JL.
5	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
6	collection	TopSpin		Bruker Biospin