7OAN

Nanobody C5 bound to Spike


ELECTRON MICROSCOPY

Refinement

RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.697
r_dihedral_angle_4_deg14.507
r_dihedral_angle_3_deg13.723
r_long_range_B_refined13.636
r_long_range_B_other13.636
r_dihedral_angle_1_deg5.789
r_mcangle_it5.072
r_mcangle_other5.072
r_scangle_other4.148
r_mcbond_it2.696
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.697
r_dihedral_angle_4_deg14.507
r_dihedral_angle_3_deg13.723
r_long_range_B_refined13.636
r_long_range_B_other13.636
r_dihedral_angle_1_deg5.789
r_mcangle_it5.072
r_mcangle_other5.072
r_scangle_other4.148
r_mcbond_it2.696
r_mcbond_other2.696
r_scbond_it2.127
r_scbond_other2.127
r_angle_other_deg1.461
r_angle_refined_deg1.175
r_chiral_restr0.058
r_bond_refined_d0.007
r_gen_planes_refined0.004
r_gen_planes_other0.002
r_bond_other_d
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Sample
nanobody complex
Specimen Preparation
Sample Aggregation State2D ARRAY
Vitrification Instrument
Cryogen NameETHANE
Sample Vitrification Details
3D Reconstruction
Reconstruction MethodSINGLE PARTICLE
Number of Particles227898
Reported Resolution (Å)3
Resolution MethodFSC 0.143 CUT-OFF
Other Details
Refinement Type
Symmetry TypePOINT
Point SymmetryC3
Map-Model Fitting and Refinement
Id1
Refinement Space
Refinement Protocol
Refinement Target
Overall B Value
Fitting Procedure
Details
Data Acquisition
Detector TypeFEI FALCON III (4k x 4k)
Electron Dose (electrons/Å**2)50
Imaging Experiment1
Date of Experiment
Temperature (Kelvin)
Microscope ModelFEI TITAN KRIOS
Minimum Defocus (nm)
Maximum Defocus (nm)
Minimum Tilt Angle (degrees)
Maximum Tilt Angle (degrees)
Nominal CS
Imaging ModeBRIGHT FIELD
Specimen Holder Model
Nominal Magnification
Calibrated Magnification
SourceFIELD EMISSION GUN
Acceleration Voltage (kV)300
Imaging Details
Image Processing
CTF Correction TypeCTF Correction DetailsNumber of Particles SelectedParticle Selection Details
NONE