7NCX

Crystal structure of GH30 (double mutant EE) from Thermothelomyces thermophila.


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP293PEG1500, TBG buffer
Crystal Properties
Matthews coefficientSolvent content
1.9430.54

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 38.887α = 90
b = 87.315β = 90
c = 107.917γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS3 S 6M2020-02-07MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONBESSY BEAMLINE 14.10.9184BESSY14.1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.3645.999.7119.812.179578
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.361.380.539

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTFREE R-VALUE6KRL1.3643.69679501402499.5740.1240.12210.158115.592
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
1.389-0.823-0.566
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.26
r_dihedral_angle_4_deg19.091
r_dihedral_angle_3_deg11.503
r_dihedral_angle_1_deg6.96
r_lrange_it3.194
r_lrange_other3.193
r_scangle_it2.403
r_scangle_other2.403
r_scbond_it2.066
r_scbond_other2.065
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.26
r_dihedral_angle_4_deg19.091
r_dihedral_angle_3_deg11.503
r_dihedral_angle_1_deg6.96
r_lrange_it3.194
r_lrange_other3.193
r_scangle_it2.403
r_scangle_other2.403
r_scbond_it2.066
r_scbond_other2.065
r_mcangle_it1.998
r_mcangle_other1.998
r_rigid_bond_restr1.898
r_angle_refined_deg1.576
r_angle_other_deg1.545
r_mcbond_it1.524
r_mcbond_other1.523
r_symmetry_nbd_refined0.214
r_nbd_refined0.212
r_nbd_other0.208
r_symmetry_nbd_other0.188
r_nbtor_refined0.171
r_symmetry_xyhbond_nbd_refined0.16
r_xyhbond_nbd_refined0.15
r_chiral_restr0.083
r_symmetry_nbtor_other0.083
r_bond_refined_d0.009
r_gen_planes_refined0.008
r_bond_other_d0.003
r_gen_planes_other0.002
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3331
Nucleic Acid Atoms
Solvent Atoms515
Heterogen Atoms107

Software

Software
Software NamePurpose
REFMACrefinement
Aimlessdata reduction
XDSdata scaling
PHASERphasing