7MY8

Fusion Peptide of SARS-CoV-2 Spike Rearranges into a Wedge Inserted in Bilayered Micelles


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N TROSY0.4 mM [U-99% 15N] Spike Fusion Peptide, Bicelles90% H2O/10% D2O0 M5.00 Pa305Bruker AVANCE III 800
22D 1H-13C HSQC aliphatic0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles90% H2O/10% D2O0 M5.00 Pa305Bruker AVANCE III 800
33D HNCO0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles90% H2O/10% D2O0 M5.00 Pa305Bruker AVANCE III 800
43D HNCACO0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles90% H2O/10% D2O0 M5.00 Pa305Bruker AVANCE III 800
53D CBCA(CO)NH0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles90% H2O/10% D2O0 M5.00 Pa305Bruker AVANCE III 800
63D HNCACB0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles90% H2O/10% D2O0 M5.00 Pa305Bruker AVANCE III 800
73D C(CO)NH0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles90% H2O/10% D2O0 M5.00 Pa305Bruker AVANCE III 800
83D H(CCO)NH0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles90% H2O/10% D2O0 M5.00 Pa305Bruker AVANCE III 800
93D HCCH-TOCSY0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles90% H2O/10% D2O0 M5.00 Pa305Bruker AVANCE III 800
103D 15N Separated NOESY0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles90% H2O/10% D2O0 M5.00 Pa305Bruker AVANCE III 800
113D 13C Separated NOESY0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles90% H2O/10% D2O0 M5.00 Pa305Bruker AVANCE III 800
123D 13C TROSY edited NOESY0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles90% H2O/10% D2O0 M5.00 Pa305Bruker AVANCE III 800
132D 13C (Hb)Cb(CgCd)Hd0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles90% H2O/10% D2O0 M5.00 Pa305Bruker AVANCE III 800
142D 13C (Hb)Cb(CgCd)He0.4 mM [U-99% 13C; U-99% 15N] Spike Fusion Peptide, Bicelles90% H2O/10% D2O0 M5.00 Pa305Bruker AVANCE III 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III800
2BrukerAVANCE III800
NMR Refinement
MethodDetailsSoftware
molecular dynamicsGROMACS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number50
Conformers Submitted Total Number15
Representative Model1 (medoid)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentNMRFAM-SPARKYWoonghee Lee , Marco Tonelli , John L Markley
2structure calculationCYANA3.0Guntert, Mumenthaler and Wuthrich
3refinementGROMACSBerendsen
4peak pickingNMRFAM-SPARKYWoonghee Lee , Marco Tonelli , John L Markley