7KZR

Structure of the human Fanconi Anaemia Core-UBE2T-ID complex


ELECTRON MICROSCOPY

Refinement

RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.707
r_dihedral_angle_4_deg16.249
r_dihedral_angle_3_deg16.009
r_long_range_B_refined14.202
r_long_range_B_other14.202
r_dihedral_angle_1_deg8.608
r_mcangle_it5.153
r_mcangle_other5.153
r_scangle_other4.146
r_mcbond_it2.778
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.707
r_dihedral_angle_4_deg16.249
r_dihedral_angle_3_deg16.009
r_long_range_B_refined14.202
r_long_range_B_other14.202
r_dihedral_angle_1_deg8.608
r_mcangle_it5.153
r_mcangle_other5.153
r_scangle_other4.146
r_mcbond_it2.778
r_mcbond_other2.778
r_scbond_it2.033
r_scbond_other2.033
r_angle_other_deg1.61
r_angle_refined_deg1.56
r_chiral_restr0.081
r_bond_other_d0.013
r_bond_refined_d0.012
r_gen_planes_refined0.006
r_gen_planes_other0.003
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Sample
Human Fanconi Anaemia Core-UBE2T-ID complex
Specimen Preparation
Sample Aggregation StatePARTICLE
Vitrification Instrument
Cryogen NameETHANE
Sample Vitrification Details
3D Reconstruction
Reconstruction MethodSINGLE PARTICLE
Number of Particles114249
Reported Resolution (Å)4.4
Resolution MethodFSC 0.143 CUT-OFF
Other Details
Refinement Type
Symmetry TypePOINT
Map-Model Fitting and Refinement
Id1
Refinement Space
Refinement Protocol
Refinement Target
Overall B Value
Fitting Procedure
Details
Data Acquisition
Detector TypeGATAN K2 SUMMIT (4k x 4k)
Electron Dose (electrons/Å**2)60
Imaging Experiment1
Date of Experiment
Temperature (Kelvin)
Microscope ModelFEI TITAN KRIOS
Minimum Defocus (nm)
Maximum Defocus (nm)
Minimum Tilt Angle (degrees)
Maximum Tilt Angle (degrees)
Nominal CS
Imaging ModeBRIGHT FIELD
Specimen Holder Model
Nominal Magnification
Calibrated Magnification
SourceFIELD EMISSION GUN
Acceleration Voltage (kV)300
Imaging Details
Image Processing
CTF Correction TypeCTF Correction DetailsNumber of Particles SelectedParticle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION