7ATH

Crystal structure of UipA

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP		293	MES pH6 100mM, PEG6K 22%, ZnCl2 5-15mM Formamide 6%

Crystal Properties
Matthews coefficient	Solvent content
2.84	56.66

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 96.13	α = 90
b = 96.13	β = 90
c = 52.55	γ = 90

Symmetry
Space Group	P 43 21 2

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS EIGER X 16M		2019-09-29	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	SOLEIL BEAMLINE PROXIMA 1	0.99987	SOLEIL	PROXIMA 1

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.2	43	99.8	0.99	17.5	14		23892

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.2	2.33			0.53

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	SAD	FREE R-VALUE	2.343	42.991	10791	540	99.741	0.22	0.2184	0.2474	71.975

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-2.236			-2.236		4.472

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	44.297
r_dihedral_angle_4_deg	24.187
r_dihedral_angle_3_deg	18.168
r_lrange_it	14.878
r_lrange_other	14.871
r_scangle_it	12.535
r_scangle_other	12.525
r_scbond_it	9.194
r_scbond_other	9.185
r_mcangle_it	9.173
r_mcangle_other	9.169
r_dihedral_angle_1_deg	8.228
r_mcbond_it	6.405
r_mcbond_other	6.405
r_angle_refined_deg	1.842
r_angle_other_deg	1.408
r_symmetry_xyhbond_nbd_refined	0.408
r_symmetry_nbd_refined	0.284
r_nbd_refined	0.236
r_xyhbond_nbd_refined	0.218
r_symmetry_nbd_other	0.194
r_nbd_other	0.193
r_nbtor_refined	0.16
r_xyhbond_nbd_other	0.117
r_symmetry_nbtor_other	0.09
r_chiral_restr	0.073
r_symmetry_xyhbond_nbd_other	0.035
r_bond_refined_d	0.011
r_gen_planes_refined	0.009
r_metal_ion_refined	0.009
r_symmetry_metal_ion_refined	0.009
r_gen_planes_other	0.002
r_bond_other_d	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	962
Nucleic Acid Atoms
Solvent Atoms	8
Heterogen Atoms	5

Software

Software
Software Name	Purpose
REFMAC	refinement
XDS	data reduction
XSCALE	data scaling
PHENIX	phasing