7AFQ

Ribosome binding factor A (RbfA)

SOLUTION NMR

---

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	400 uM [U-13C; U-15N] RbfA, 10 mM HEPES, 6 mM MgCl2, 30 mM NH4Cl, 75 uM TCEP	90% H2O/10% D2O	40 mM	7.6	1 atm	293	Bruker AVANCE III 800
2	3D HNCO	400 uM [U-13C; U-15N] RbfA, 10 mM HEPES, 6 mM MgCl2, 30 mM NH4Cl, 75 uM TCEP	90% H2O/10% D2O	40 mM	7.6	1 atm	293	Bruker AVANCE III 800
3	3D HNCA	400 uM [U-13C; U-15N] RbfA, 10 mM HEPES, 6 mM MgCl2, 30 mM NH4Cl, 75 uM TCEP	90% H2O/10% D2O	40 mM	7.6	1 atm	293	Bruker AVANCE III 800
4	3D HNCACB	400 uM [U-13C; U-15N] RbfA, 10 mM HEPES, 6 mM MgCl2, 30 mM NH4Cl, 75 uM TCEP	90% H2O/10% D2O	40 mM	7.6	1 atm	293	Bruker AVANCE III 800
5	3D CBCA(CO)NH	400 uM [U-13C; U-15N] RbfA, 10 mM HEPES, 6 mM MgCl2, 30 mM NH4Cl, 75 uM TCEP	90% H2O/10% D2O	40 mM	7.6	1 atm	293	Bruker AVANCE III 800
6	3D HN(CO)CA	400 uM [U-13C; U-15N] RbfA, 10 mM HEPES, 6 mM MgCl2, 30 mM NH4Cl, 75 uM TCEP	90% H2O/10% D2O	40 mM	7.6	1 atm	293	Bruker AVANCE III 800
11	3D HNCAHA	400 uM [U-13C; U-15N] RbfA, 10 mM HEPES, 6 mM MgCl2, 30 mM NH4Cl, 75 uM TCEP	90% H2O/10% D2O	40 mM	7.6	1 atm	293	Bruker AVANCE III 800
10	3D HCCH-TOCSY	400 uM [U-13C; U-15N] RbfA, 10 mM HEPES, 6 mM MgCl2, 30 mM NH4Cl, 75 uM TCEP	90% H2O/10% D2O	40 mM	7.6	1 atm	293	Bruker AVANCE III 600
9	3D HN(CA)CO	400 uM [U-13C; U-15N] RbfA, 10 mM HEPES, 6 mM MgCl2, 30 mM NH4Cl, 75 uM TCEP	90% H2O/10% D2O	40 mM	7.6	1 atm	293	Bruker AVANCE III 800
8	3D HNH NOESY	400 uM [U-13C; U-15N] RbfA, 10 mM HEPES, 6 mM MgCl2, 30 mM NH4Cl, 75 uM TCEP	90% H2O/10% D2O	40 mM	7.6	1 atm	293	Bruker AVANCE III 800
7	3D CNH NOESY	400 uM [U-13C; U-15N] RbfA, 10 mM HEPES, 6 mM MgCl2, 30 mM NH4Cl, 75 uM TCEP	90% H2O/10% D2O	40 mM	7.6	1 atm	293	Bruker AVANCE III 800
13	3D HN(CO)CAHA	400 uM [U-13C; U-15N] RbfA, 10 mM HEPES, 6 mM MgCl2, 30 mM NH4Cl, 75 uM TCEP	90% H2O/10% D2O	40 mM	7.6	1 atm	293	Bruker AVANCE III 800
12	3D HCH NOESY	400 uM [U-13C; U-15N] RbfA, 10 mM HEPES, 6 mM MgCl2, 30 mM NH4Cl, 75 uM TCEP	90% H2O/10% D2O	40 mM	7.6	1 atm	293	Bruker AVANCE III 800

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III	600
2	Bruker	AVANCE III	800

NMR Refinement
Method	Details	Software
simulated annealing		X-PLOR NIH
molecular dynamics		GROMACS

NMR Ensemble Information
Conformer Selection Criteria	target function
Conformers Calculated Total Number	60
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2	chemical shift assignment	Sparky		Goddard
3	chemical shift assignment	CcpNmr Analysis		CCPN
4	peak picking	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
5	structure calculation	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore
6	refinement	GROMACS		Emile Apol, Rossen Apostolov, Paul Bauer, Herman J.C. Berendsen, Par Bjelkmar, Christian Blau, Viacheslav Bolnykh, Kevin Boyd, Aldert van Buuren, Rudi van Drunen, Anton Feenstra, Alan Gray, Gerrit Groenhof, Anca Hamuraru, Vincent Hindriksen M. Eric Irrgang, Aleksei Iupinov, Christoph Junghans, Joe Jordan, Dimitrios Karkoulis, Peter Kasson,, Jiri Kraus, Carsten Kutzner, Per Larsson, Justin A. Lemkul, Viveca Lindahl, Magnus Lundborg, Erik Marklund, Pascal Merz, Pieter Meulenhoff, Teemu Murtola, Szilard Pall, Sander Pronk, Roland Schulz, Michael Shirts, Alexey Shvetsov, Alfons Sijbers, Peter Tieleman, Jon Vincent, Teemu Virolainen, Christian Wennberg, Maarten Wolf, Artem Zhmurov.