6ZZB

Crystal structure of the Eimeria tenella surface antigen protein SAG19


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP2903.15 M ammonium sulfate, 0.1 M citrate buffer pH 5
Crystal Properties
Matthews coefficientSolvent content
2.141.31

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 108.12α = 90
b = 108.12β = 90
c = 37.42γ = 90
Symmetry
Space GroupI 4

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 3152009-11-29MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONDIAMOND BEAMLINE I020.9795DiamondI02

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Rpim I (All)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.3223.41196.90.0360.0240.99917.65.549236
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Rpim I (All)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.321.340.5790.4840.5351.4

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONSADFREE R-VALUE1.32223.449236249496.7310.1660.16520.187617.507
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.0710.071-0.141
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.587
r_dihedral_angle_4_deg15.563
r_dihedral_angle_3_deg11.338
r_dihedral_angle_1_deg6.672
r_lrange_it6.236
r_lrange_other5.837
r_scangle_it3.83
r_scangle_other3.803
r_scbond_it2.501
r_scbond_other2.475
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.587
r_dihedral_angle_4_deg15.563
r_dihedral_angle_3_deg11.338
r_dihedral_angle_1_deg6.672
r_lrange_it6.236
r_lrange_other5.837
r_scangle_it3.83
r_scangle_other3.803
r_scbond_it2.501
r_scbond_other2.475
r_mcangle_it2.458
r_mcangle_other2.457
r_angle_refined_deg1.596
r_mcbond_it1.59
r_mcbond_other1.588
r_angle_other_deg1.529
r_nbd_refined0.221
r_symmetry_xyhbond_nbd_refined0.209
r_xyhbond_nbd_refined0.189
r_symmetry_nbd_other0.176
r_nbtor_refined0.171
r_nbd_other0.16
r_symmetry_nbtor_other0.084
r_symmetry_nbd_refined0.084
r_chiral_restr0.081
r_bond_refined_d0.011
r_gen_planes_refined0.008
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1431
Nucleic Acid Atoms
Solvent Atoms259
Heterogen Atoms10

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
XDSdata scaling
AutoSolphasing