6YE5

Structure of ribosomal binding factor A RbfA of Staphylococcus aureus bacterium by NMR


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D HNHA0.9 mM [U-99% 15N] ribosome Binding Factor A95% H2O/5% D2O07.41 atm308Bruker AVANCE III 700
23D HNHB0.9 mM [U-99% 15N] ribosome Binding Factor A95% H2O/5% D2O07.41 atm308Bruker AVANCE III 700
33D 1H-15N TOCSY0.9 mM [U-99% 15N] ribosome Binding Factor A95% H2O/5% D2O07.41 atm308Bruker AVANCE III 700
43D HNCA1.7 mM [U-99% 13C; U-99% 15N] ribosome Binding Factor A95% H2O/5% D2O07.41 atm308Bruker AVANCE III 700
53D HNCACB1.7 mM [U-99% 13C; U-99% 15N] ribosome Binding Factor A95% H2O/5% D2O07.41 atm308Bruker AVANCE III 700
123D CBCA(CO)NH1.7 mM [U-99% 13C; U-99% 15N] ribosome Binding Factor A95% H2O/5% D2O07.41 atm308Bruker AVANCE III 700
113D HNCO1.7 mM [U-99% 13C; U-99% 15N] ribosome Binding Factor A95% H2O/5% D2O07.41 atm308Bruker AVANCE III 700
103D C(CO)NH1.7 mM [U-99% 13C; U-99% 15N] ribosome Binding Factor A95% H2O/5% D2O07.41 atm308Bruker AVANCE III 700
93D HN(CO)CA1.7 mM [U-99% 13C; U-99% 15N] ribosome Binding Factor A95% H2O/5% D2O07.41 atm308Bruker AVANCE III 700
82D 1H-13C HSQC1.7 mM [U-99% 13C; U-99% 15N] ribosome Binding Factor A95% H2O/5% D2O07.41 atm308Bruker AVANCE III 700
72D 1H-15N HSQC0.9 mM [U-99% 15N] ribosome Binding Factor A95% H2O/5% D2O07.41 atm308Bruker AVANCE III 700
63D 1H-15N NOESY1.7 mM [U-99% 13C; U-99% 15N] ribosome Binding Factor A95% H2O/5% D2O07.41 atm308Bruker AVANCE III 700
132D 1H-1H NOESY0.9 mM [U-99% 15N] ribosome Binding Factor A95% H2O/5% D2O07.41 atm308Bruker AVANCE III 700
143D 1H-13C NOESY aliphatic1.7 mM [U-99% 13C; U-99% 15N] ribosome Binding Factor A95% H2O/5% D2O07.41 atm308Bruker AVANCE III 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III700
NMR Refinement
MethodDetailsSoftware
molecular dynamicsX-PLOR NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number1000
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentCNSBrunger A. T. et.al.
2structure calculationX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
3data analysisTALOSCornilescu, Delaglio and Bax
4processingTopSpin3.5Bruker Biospin