6TUR

human XPG, Apo1 form

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP		295	25% PEG 3350, 100 mM Citric acid pH 3.5

Crystal Properties
Matthews coefficient	Solvent content
2.87	57.21

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 78.24	α = 90
b = 89.56	β = 90
c = 268.95	γ = 90

Symmetry
Space Group	P 21 21 21

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS 6M		2013-02-13	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	ALBA BEAMLINE XALOC	0.9786	ALBA	XALOC

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.9	134.475	100	0.998	13.1	80		42886

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.9	3.01			0.528

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	SAD	FREE R-VALUE	2.9	67.6	42828	1071	99.995	0.239	0.2375	0.2814	101.744

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-5.093			6.335		-1.242

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	32.261
r_lrange_it	18.764
r_lrange_other	18.763
r_dihedral_angle_4_deg	17.777
r_dihedral_angle_3_deg	17.511
r_mcangle_it	14.757
r_mcangle_other	14.756
r_scangle_it	14.641
r_scangle_other	14.64
r_mcbond_it	9.928
r_mcbond_other	9.912
r_scbond_it	9.506
r_scbond_other	9.505
r_dihedral_angle_1_deg	6.914
r_angle_refined_deg	1.487
r_angle_other_deg	1.155
r_xyhbond_nbd_other	0.304
r_nbd_other	0.277
r_symmetry_xyhbond_nbd_refined	0.264
r_nbd_refined	0.224
r_symmetry_nbd_refined	0.218
r_symmetry_nbd_other	0.194
r_nbtor_refined	0.165
r_xyhbond_nbd_refined	0.164
r_ncsr_local_group_3	0.148
r_ncsr_local_group_5	0.148
r_ncsr_local_group_6	0.144
r_ncsr_local_group_1	0.143
r_ncsr_local_group_2	0.139
r_ncsr_local_group_4	0.127
r_symmetry_nbtor_other	0.082
r_chiral_restr	0.071
r_bond_refined_d	0.007
r_gen_planes_refined	0.006
r_bond_other_d	0.001
r_gen_planes_other	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	10271
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms

Software

Software
Software Name	Purpose
REFMAC	refinement
XDS	data reduction
XSCALE	data scaling
PHASER	phasing