6TTC

Haddock model of NDM-1/myricetin complex


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC320 uM [U-13C; U-15N] NDM-190% H2O/10% D2O150 mM71 atm293Bruker AVANCE II 600
22D 1H-15N HSQC320 uM [U-13C; U-15N] NDM-190% H2O/10% D2O150 mM71 atm293Bruker AVANCE III 800
33D HNCO320 uM [U-13C; U-15N] NDM-190% H2O/10% D2O150 mM71 atm293Bruker AVANCE II 600
43D HNCA320 uM [U-13C; U-15N] NDM-190% H2O/10% D2O150 mM71 atm293Bruker AVANCE II 600
53D HNCACB320 uM [U-13C; U-15N] NDM-190% H2O/10% D2O150 mM71 atm293Bruker AVANCE II 600
8HNCOCA320 uM [U-13C; U-15N] NDM-190% H2O/10% D2O150 mM71 atm293Bruker AVANCE II 600
7HNCOCACB320 uM [U-13C; U-15N] NDM-190% H2O/10% D2O150 mM71 atm293Bruker AVANCE II 600
6HNCACO320 uM [U-13C; U-15N] NDM-190% H2O/10% D2O150 mM71 atm293Bruker AVANCE II 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE II600
2BrukerAVANCE III800
NMR Refinement
MethodDetailsSoftware
simulated annealingHADDOCK
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number200
Conformers Submitted Total Number4
Representative Model1 (target function)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpin3.5Bruker Biospin
2chemical shift assignmentCcpNmr AnalysisCCPN
3peak pickingCcpNmr AnalysisCCPN
4structure calculationHADDOCKBonvin