6TNL

GSTF1 from Alopecurus myosuroides


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.5298Ammonium sulfate/PEG400
Crystal Properties
Matthews coefficientSolvent content
2.550.75

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 180.78α = 90
b = 180.78β = 90
c = 237.888γ = 120
Symmetry
Space GroupH 3 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2010-06-30MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X06SA1.0SLSX06SA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.955099.90.05726.56.3108121
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.951.981000.4863.86.3

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONFOURIER SYNTHESISFREE R-VALUE1.9541.947107247535399.0980.2610.25950.283635.856
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.0820.0410.082-0.268
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg26.69
r_dihedral_angle_4_deg18.898
r_dihedral_angle_3_deg14.604
r_dihedral_angle_1_deg6.13
r_lrange_it5.522
r_lrange_other5.501
r_scangle_it3.505
r_scangle_other3.469
r_mcangle_it2.899
r_mcangle_other2.899
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg26.69
r_dihedral_angle_4_deg18.898
r_dihedral_angle_3_deg14.604
r_dihedral_angle_1_deg6.13
r_lrange_it5.522
r_lrange_other5.501
r_scangle_it3.505
r_scangle_other3.469
r_mcangle_it2.899
r_mcangle_other2.899
r_angle_other_deg2.366
r_scbond_it2.186
r_scbond_other2.15
r_angle_refined_deg1.882
r_mcbond_it1.705
r_mcbond_other1.704
r_symmetry_xyhbond_nbd_refined0.259
r_nbd_refined0.236
r_symmetry_nbd_refined0.235
r_symmetry_nbd_other0.223
r_nbd_other0.223
r_nbtor_refined0.185
r_xyhbond_nbd_refined0.18
r_symmetry_xyhbond_nbd_other0.111
r_symmetry_nbtor_other0.097
r_chiral_restr0.096
r_bond_other_d0.035
r_gen_planes_other0.023
r_bond_refined_d0.016
r_gen_planes_refined0.014
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms9010
Nucleic Acid Atoms
Solvent Atoms587
Heterogen Atoms15

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
REFMACphasing