X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP293.150.1 MES pH 6.5, 1.2 M Potassium/Sodium tartrate
Crystal Properties
Matthews coefficientSolvent content
2.3848.46

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 87.073α = 90
b = 87.073β = 90
c = 152.994γ = 120
Symmetry
Space GroupP 3 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS 6M-F2016-03-14MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X10SA1SLSX10SA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.4538.2599.80.0920.99916.988.725325
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.452.510.842

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTFREE R-VALUE6T762.4538.24925325126799.7830.2240.22150.271360.286
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
1.1290.5641.129-3.661
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.44
r_dihedral_angle_3_deg15.961
r_dihedral_angle_4_deg12.932
r_dihedral_angle_1_deg6.095
r_lrange_it4.05
r_lrange_other4.05
r_scangle_it2.596
r_scangle_other2.595
r_mcangle_it1.945
r_mcangle_other1.944
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.44
r_dihedral_angle_3_deg15.961
r_dihedral_angle_4_deg12.932
r_dihedral_angle_1_deg6.095
r_lrange_it4.05
r_lrange_other4.05
r_scangle_it2.596
r_scangle_other2.595
r_mcangle_it1.945
r_mcangle_other1.944
r_scbond_it1.622
r_scbond_other1.622
r_angle_refined_deg1.243
r_mcbond_it1.218
r_mcbond_other1.218
r_angle_other_deg0.708
r_symmetry_nbd_refined0.206
r_nbd_refined0.202
r_nbtor_refined0.178
r_nbd_other0.171
r_symmetry_nbd_other0.167
r_symmetry_xyhbond_nbd_refined0.145
r_xyhbond_nbd_refined0.125
r_symmetry_nbtor_other0.081
r_chiral_restr0.065
r_symmetry_xyhbond_nbd_other0.023
r_bond_refined_d0.007
r_gen_planes_refined0.004
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4874
Nucleic Acid Atoms
Solvent Atoms16
Heterogen Atoms48

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
XDSdata scaling
MOLREPphasing