6OQH

Solution NMR structure of a quiet outer membrane protein G Nanopore (OmpG mutant: Delta-L6-D215)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D HNCA1 mM [U-13C; U-15N; U-2H] OmpG delta-L6-D215 mutant, 200 mM DPC, 25 mM Bis-Tris, 50 mM sodium chloride, 0.05 % w/v sodium azide90% H2O/10% D2O50 mM6.31 atm313Bruker AVANCE III 800
23D HNCACB1 mM [U-13C; U-15N; U-2H] OmpG delta-L6-D215 mutant, 200 mM DPC, 25 mM Bis-Tris, 50 mM sodium chloride, 0.05 % w/v sodium azide90% H2O/10% D2O50 mM6.31 atm313Bruker AVANCE III 800
33D HNCO1 mM [U-13C; U-15N; U-2H] OmpG delta-L6-D215 mutant, 200 mM DPC, 25 mM Bis-Tris, 50 mM sodium chloride, 0.05 % w/v sodium azide90% H2O/10% D2O50 mM6.31 atm313Bruker AVANCE III 800
43D HN(CA)CO1 mM [U-13C; U-15N; U-2H] OmpG delta-L6-D215 mutant, 200 mM DPC, 25 mM Bis-Tris, 50 mM sodium chloride, 0.05 % w/v sodium azide90% H2O/10% D2O50 mM6.31 atm313Bruker AVANCE III 800
53D 15N-1H-1H NOESY-TROSY1 mM [U-13C; U-15N; U-2H] OmpG delta-L6-D215 mutant, 200 mM DPC, 25 mM Bis-Tris, 50 mM sodium chloride, 0.05 % w/v sodium azide90% H2O/10% D2O50 mM6.31 atm313Bruker AVANCE III 800
63D 15N-1H-15N HSQC-NOESY-HSQC1 mM [U-13C; U-15N; U-2H] OmpG delta-L6-D215 mutant, 200 mM DPC, 25 mM Bis-Tris, 50 mM sodium chloride, 0.05 % w/v sodium azide90% H2O/10% D2O50 mM6.31 atm313Bruker AVANCE III 800
72D 1H-15N HSQC1 mM [U-13C; U-15N; U-2H] OmpG delta-L6-D215 mutant, 200 mM DPC, 25 mM Bis-Tris, 50 mM sodium chloride, 0.05 % w/v sodium azide90% H2O/10% D2O50 mM6.31 atm313Bruker AVANCE III 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III800
NMR Refinement
MethodDetailsSoftware
simulated annealingCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentSparky3Goddard and Kneller
2structure calculationCNS1.2Brunger, Adams, Clore, Gros, Nilges and Read
3data analysisNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax