6N8C

Structure of the Huntingtin tetramer/dimer mixture determined by paramagnetic NMR


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1 mM [U-13C; U-15N] httNT-Q790% H2O/10% D2O50 mM6.51 atm278Bruker AVANCE III 600
22D 1H-13C CT HSQC1 mM [U-13C; U-15N] httNT-Q790% H2O/10% D2O50 mM6.51 atm278Bruker AVANCE III 600
33D CBCA(CO)NH1 mM [U-13C; U-15N] httNT-Q790% H2O/10% D2O50 mM6.51 atm283Bruker AVANCE III 600
43D HNCACB1 mM [U-13C; U-15N] httNT-Q790% H2O/10% D2O50 mM6.51 atm283Bruker AVANCE III 600
53D TOCSY-HSQC0.6 mM [U-15N] httNT-Q790% H2O/10% D2O50 mM6.51 atm283Bruker AVANCE III 800
613CA SQ CPMG1 mM 2-13C glucose; U-15N httNT-Q790% H2O/10% D2O50 mM6.51 atm278Bruker AVANCE III 600
713CA SQ CPMG0.75 mM 2-13C glucose; U-15N httNT-Q790% H2O/10% D2O50 mM6.51 atm278Bruker AVANCE III 900
815N SQ CPMG1 mM 2-13C glucose; U-15N httNT-Q790% H2O/10% D2O50 mM6.51 atm278Bruker AVANCE III 600
915N SQ CPMG0.75 mM 2-13C glucose; U-15N httNT-Q790% H2O/10% D2O50 mM6.51 atm278Bruker AVANCE III 900
101HN PRE0.6 mM [U-15N] httNT-Q790% H2O/10% D2O50 mM6.51 atm283Bruker AVANCE III 600
1113CA SQ CPMG0.4 mM 2-13C glucose; U-15N httNT-Q790% H2O/10% D2O50 mM6.51 atm278
1215N SQ CPMG0.4 mM 2-13C glucose; U-15N httNT-Q790% H2O/10% D2O50 mM6.51 atm278
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III600
2BrukerAVANCE III800
3BrukerAVANCE III900
NMR Refinement
MethodDetailsSoftware
simulated annealingutilized rigid backbone coordinates for helix region and employed Xplor-NIH's strict symmetry facility to generage full tetramer from protomer coordinates.Xplor-NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number1100
Conformers Submitted Total Number10
Representative Model1 (best fits pre data)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure calculationXplor-NIH2.49C.D. Schwieters, J.J. Kuszewski, N. Tjandra, and G.M. Clore
3chemical shift assignmentAnalysis2.4CCPN
4peak pickingNMRDrawDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
5data analysisNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
6processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
7collectionTopSpinBruker Biospin