6KU5

Notothenia coriiceps TRAF5

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP	7	293.15	20%(w/v) PEG-6000, 0.1M HEPES pH 7.0, 0.2M Sodium chloride

Crystal Properties
Matthews coefficient	Solvent content
3.44	64.26

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 85.544	α = 90
b = 85.544	β = 90
c = 148.598	γ = 120

Symmetry
Space Group	P 3 2 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	125	PIXEL	DECTRIS EIGER X 9M		2019-05-18	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	PAL/PLS BEAMLINE 5C (4A)	1.0000	PAL/PLS	5C (4A)

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Sym I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	3.299	42.81	100	0.201	19.16	18.5		9935

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R-Sym I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	3.299	7.39			1.704

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	FREE R-VALUE	3.299	42.804	9931	984	99.769	0.25	0.2461	0.2865	80.209

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
0.061	0.031		0.061		-0.198

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	35.444
r_dihedral_angle_3_deg	18.733
r_dihedral_angle_4_deg	18.649
r_lrange_it	9.675
r_lrange_other	9.674
r_scangle_other	7.574
r_scangle_it	7.572
r_mcangle_other	7.347
r_mcangle_it	7.346
r_dihedral_angle_1_deg	5.09
r_scbond_it	4.949
r_scbond_other	4.947
r_mcbond_it	4.748
r_mcbond_other	4.724
r_angle_other_deg	1.529
r_angle_refined_deg	1.404
r_symmetry_nbd_refined	0.434
r_nbd_other	0.409
r_symmetry_nbd_other	0.244
r_nbd_refined	0.209
r_xyhbond_nbd_refined	0.206
r_nbtor_refined	0.179
r_symmetry_nbtor_other	0.088
r_chiral_restr	0.068
r_symmetry_xyhbond_nbd_other	0.012
r_bond_refined_d	0.007
r_gen_planes_refined	0.005
r_bond_other_d	0.003
r_gen_planes_other	0.002

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	3052
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms

Software

Software
Software Name	Purpose
REFMAC	refinement
HKL-2000	data reduction
HKL-2000	data scaling
PHASER	phasing