6KN2
Structure of single disulfide peptide Czon1107-WT (major conformer)
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D DQF-COSY | 3.0 mM Czon1107-WT major conformer | 90% H2O/10% D2O | 0 | 7.0 | 1 atm | 298 | Varian INOVA 600 |
2 | 2D 1H-1H TOCSY | 3.0 mM Czon1107-WT major conformer | 90% H2O/10% D2O | 0 | 7.0 | 1 atm | 298 | Bruker AVANCE 700 |
3 | 2D 1H-1H NOESY | 3.0 mM Czon1107-WT major conformer | 90% H2O/10% D2O | 0 | 7.0 | 1 atm | 298 | Bruker AVANCE 700 |
4 | 2D 1H-13C HSQC | 3.0 mM Czon1107-WT major conformer | 90% H2O/10% D2O | 0 | 7.0 | 1 atm | 298 | Varian INOVA 600 |
5 | 2D 1H-13C HSQCTOCSY | 3.0 mM Czon1107-WT major conformer | 90% H2O/10% D2O | 0 | 7.0 | 1 atm | 298 | Varian INOVA 600 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
2 | Bruker | AVANCE | 700 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | X-PLOR NIH |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 27 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich | |
2 | chemical shift assignment | CcpNmr Analysis | CCPN | |
3 | data analysis | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
4 | peak picking | CcpNmr Analysis | CCPN | |
5 | refinement | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore |