6HPI
NMR structure of the pro-inflammatory cytokine interleukin-36alpha
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 1.3 mM [U-100% 15N] Interleukin-36alpha, 20 mM no sodium phosphate | 90% H2O/10% D2O | 0 M | 6.9 | 1 atm | 273 | Bruker AVANCE III 750 |
2 | 2D 1H-13C HSQC | 1.3 mM [U-100% 13C; U-100% 15N] Interleukin-36alpha, 20 mM no sodium phosphate | 90% H2O/10% D2O | 0 M | 6.9 | 1 atm | 273 | Bruker AVANCE III 750 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE III | 750 |
2 | Bruker | AVANCE III | 700 |
3 | Bruker | AVANCE III | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
molecular dynamics | energy minimisation | OPALp |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | OPALp | Luginbuhl, Guntert, Billeter and Wuthrich | |
2 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich | |
3 | chemical shift assignment | CcpNmr Analysis | CCPN | |
4 | peak picking | CcpNmr Analysis | CCPN |